| Generalizing RNA velocity to transient cell states through dynamical modeling V Bergen, M Lange, S Peidli, FA Wolf, FJ Theis Nature biotechnology 38 (12), 1408-1414, 2020 | 2126 | 2020 |
| Mitogen-activated protein kinase activity drives cell trajectories in colorectal cancer F Uhlitz, P Bischoff, S Peidli, A Sieber, A Trinks, M Lüthen, B Obermayer, ... EMBO Molecular Medicine 13 (10), 2021 | 78 | 2021 |
| scPerturb: harmonized single-cell perturbation data S Peidli, TD Green, C Shen, T Gross, J Min, S Garda, B Yuan, ... Nature Methods 21 (3), 531-540, 2024 | 62* | 2024 |
| Live-attenuated vaccine sCPD9 elicits superior mucosal and systemic immunity to SARS-CoV-2 variants in hamsters G Nouailles, JM Adler, P Pennitz, S Peidli, LG Teixeira Alves, ... Nature Microbiology 8 (5), 860-874, 2023 | 58 | 2023 |
| Key benefits of dexamethasone and antibody treatment in COVID-19 hamster models revealed by single-cell transcriptomics E Wyler, JM Adler, K Eschke, GT Alves, S Peidli, F Pott, J Kazmierski, ... Molecular Therapy 30 (5), 1952-1965, 2022 | 33 | 2022 |
| Pertpy: an end-to-end framework for perturbation analysis L Heumos, Y Ji, L May, T Green, X Zhang, X Wu, J Ostner, S Peidli, ... bioRxiv, 2024.08. 04.606516, 2024 | 5 | 2024 |
| High‐confidence calling of normal epithelial cells allows identification of a novel stem‐like cell state in the colorectal cancer microenvironment TT Wei, E Blanc, S Peidli, P Bischoff, A Trinks, D Horst, C Sers, ... International journal of cancer 155 (9), 1655-1669, 2024 | 3 | 2024 |
| Single-cell-resolved interspecies comparison shows a shared inflammatory axis and a dominant neutrophil-endothelial program in severe COVID-19 S Peidli, G Nouailles, E Wyler, JM Adler, S Kunder, A Voß, J Kazmierski, ... Cell Reports 43 (6), 2024 | 3 | 2024 |
| Optimal distance metrics for single-cell RNA-seq populations Y Ji, TD Green, S Peidli, M Bahrami, M Liu, L Zappia, K Hrovatin, ... bioRxiv, 2023.12. 26.572833, 2023 | 3 | 2023 |
| The decomposition of perturbation modeling S Peidli Nature Computational Science, 1-2, 2024 | | 2024 |
| Proliferation and differentiation of intestinal stem cells depends on the zinc finger transcription factor BCL11/Chronophage S Redhai, N Hirschmüller, T Wang, S Bahuguna, S Leible, S Peidli, ... bioRxiv, 2024.09. 08.611891, 2024 | | 2024 |
| Modeling the effects of niche specific microenvironmental changes on patient-derived organoids J von Schlichting, S Peidli, M Morkel, N Blüthgen, L Simon Cancer Research 83 (7_Supplement), 4644-4644, 2023 | | 2023 |
Volker BergenHelmholtz & Cellarity (Principal Scientist)Verified email at volkerbergen.de