| Detection of Enriched T Cell Epitope Specificity in Full T Cell Receptor Sequence Repertoires S Gielis, P Moris, W Bittremieux, N De Neuter, B Ogunjimi, K Laukens, ... Frontiers in Immunology 10, 2820, 2019 | 196* | 2019 |
| A primer to frequent itemset mining for bioinformatics S Naulaerts, P Meysman, W Bittremieux, TN Vu, WV Berghe, B Goethals, ... Briefings in bioinformatics 16 (2), 216-231, 2015 | 178 | 2015 |
| Current challenges for unseen-epitope TCR interaction prediction and a new perspective derived from image classification P Moris, J De Pauw, A Postovskaya, S Gielis, N De Neuter, W Bittremieux, ... Briefings in Bioinformatics, 2020 | 141 | 2020 |
| Plasma donor-derived cell-free DNA kinetics after kidney transplantation using a single tube multiplex PCR assay EM Gielis, C Beirnaert, A Dendooven, P Meysman, K Laukens, ... PloS one 13 (12), e0208207, 2018 | 127 | 2018 |
| The use of plasma donor-derived, cell-free DNA to monitor acute rejection after kidney transplantation EM Gielis, KJ Ledeganck, A Dendooven, P Meysman, C Beirnaert, ... Nephrology Dialysis Transplantation, 2019 | 95 | 2019 |
| Fast open modification spectral library searching through approximate nearest neighbor indexing W Bittremieux, P Meysman, WS Noble, K Laukens Journal of proteome research 17 (10), 3463-3474, 2018 | 88 | 2018 |
| On the feasibility of mining CD8+ T cell receptor patterns underlying immunogenic peptide recognition N De Neuter, W Bittremieux, C Beirnaert, B Cuypers, A Mrzic, P Moris, ... Immunogenetics 70 (3), 159-168, 2018 | 81 | 2018 |
| Benchmarking solutions to the T-cell receptor epitope prediction problem: IMMREP22 workshop report P Meysman, J Barton, B Bravi, L Cohen-Lavi, V Karnaukhov, E Lilleskov, ... ImmunoInformatics 9, 100024, 2023 | 73 | 2023 |
| On the viability of unsupervised T-cell receptor sequence clustering for epitope preference P Meysman, N De Neuter, S Gielis, D Bui Thi, B Ogunjimi, K Laukens Bioinformatics 35 (9), 1461-1468, 2019 | 66 | 2019 |
| COLOMBOS v3. 0: leveraging gene expression compendia for cross-species analyses M Moretto, P Sonego, N Dierckxsens, M Brilli, L Bianco, ... Nucleic acids research 44 (D1), D620-D623, 2016 | 64 | 2016 |
| Transcriptome profiling in blood before and after hepatitis B vaccination shows significant differences in gene expression between responders and non-responders E Bartholomeus, N De Neuter, P Meysman, A Suls, N Keersmaekers, ... Vaccine 36 (42), 6282-6289, 2018 | 59 | 2018 |
| Grasping frequent subgraph mining for bioinformatics applications A Mrzic, P Meysman, W Bittremieux, P Moris, B Cule, B Goethals, ... BioData mining 11, 1-24, 2018 | 56 | 2018 |
| Use of structural DNA properties for the prediction of transcription-factor binding sites in Escherichia coli P Meysman, TH Dang, K Laukens, R De Smet, Y Wu, K Marchal, ... Nucleic Acids Research 39 (2), e6-e6, 2011 | 55 | 2011 |
| speaq 2.0: a complete workflow for high-throughput 1D NMR spectra processing and quantification C Beirnaert, P Meysman, TN Vu, N Hermans, S Apers, L Pieters, A Covaci, ... PLoS computational biology 14 (3), e1006018, 2018 | 53 | 2018 |
| ClusTCR: a Python interface for rapid clustering of large sets of CDR3 sequences with unknown antigen specificity S Valkiers, M Van Houcke, K Laukens, P Meysman Bioinformatics 37 (24), 4865-4867, 2021 | 52 | 2021 |
| Recent advances in T-cell receptor repertoire analysis: bridging the gap with multimodal single-cell RNA sequencing S Valkiers, N de Vrij, S Gielis, S Verbandt, B Ogunjimi, K Laukens, ... ImmunoInformatics, 100009, 2022 | 51 | 2022 |
| Mining Association Rules in Graphs Based on Frequent Cohesive Itemsets T Hendrickx, B Cule, P Meysman, S Naulaerts, K Laukens, B Goethals Pacific-Asia Conference on Knowledge Discovery and Data Mining, 637-648, 2015 | 50 | 2015 |
| Soft skills: an important asset acquired from organizing regional student group activities J de Ridder, P Meysman, O Oluwagbemi, T Abeel PLoS Computational Biology 10 (7), e1003708, 2014 | 48 | 2014 |
| MESSAR: Automated recommendation of metabolite substructures from tandem mass spectra Y Liu, A Mrzic, P Meysman, T De Vijlder, EP Romijn, D Valkenborg, ... PloS one 15 (1), e0226770, 2020 | 45 | 2020 |
| Structural properties of prokaryotic promoter regions correlate with functional features P Meysman, J Collado-Vides, E Morett, R Viola, K Engelen, K Laukens PloS ONE 9 (2), e88717, 2014 | 45 | 2014 |
Kris LaukensProfessor Biodata Mining & Bioinformatics, University of AntwerpVerified email at uantwerpen.be