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Risa K. Kawaguchi
Risa K. Kawaguchi
Center for iPS Cell Research and Application (CiRA), Kyoto University
Verified email at cira.kyoto-u.ac.jp - Homepage
Title
Cited by
Cited by
Year
IMP dehydrogenase-2 drives aberrant nucleolar activity and promotes tumorigenesis in glioblastoma
S Kofuji, A Hirayama, AO Eberhardt, R Kawaguchi, Y Sugiura, ...
Nature cell biology 21 (8), 1003-1014, 2019
1512019
Intraductal transplantation models of human pancreatic ductal adenocarcinoma reveal progressive transition of molecular subtypes
K Miyabayashi, LA Baker, A Deschênes, B Traub, G Caligiuri, D Plenker, ...
Cancer discovery 10 (10), 1566-1589, 2020
1202020
Split-alignment of genomes finds orthologies more accurately
MC Frith, R Kawaguchi
Genome biology 16, 1-17, 2015
1102015
Fine-tuning approach for segmentation of gliomas in brain magnetic resonance images with a machine learning method to normalize image differences among facilities
S Takahashi, M Takahashi, M Kinoshita, M Miyake, R Kawaguchi, ...
Cancers 13 (6), 1415, 2021
432021
Parallel computation of genome-scale RNA secondary structure to detect structural constraints on human genome
R Kawaguchi, H Kiryu
BMC bioinformatics 17 (1), 203, 2016
322016
Assessing versatile machine learning models for glioma radiogenomic studies across hospitals
RK Kawaguchi, M Takahashi, M Miyake, M Kinoshita, S Takahashi, ...
Cancers 13 (14), 3611, 2021
182021
The transcriptional legacy of developmental stochasticity
S Ballouz, RK Kawaguchi, MT Pena, S Fischer, M Crow, L French, ...
Nature Communications 14 (1), 7226, 2023
172023
Identification of lysine methylation in the core GTPase domain by GoMADScan
H Yoshino, G Yin, R Kawaguchi, KI Popov, B Temple, M Sasaki, S Kofuji, ...
PLoS One 14 (8), e0219436, 2019
142019
Prevalent and dynamic binding of the cell cycle checkpoint kinase Rad53 to gene promoters
YJ Sheu, RK Kawaguchi, J Gillis, B Stillman
Elife 11, e84320, 2022
102022
Comprehensive in virio structure probing analysis of the influenza A virus identifies functional RNA structures involved in viral genome replication
N Takizawa, RK Kawaguchi
Computational and Structural Biotechnology Journal 21, 5259-5272, 2023
62023
A functional RNA structure in the influenza A virus ribonucleoprotein complex for segment bundling
N Takizawa, K Higashi, RK Kawaguchi, Y Gotoh, Y Suzuki, T Hayashi, ...
Elsevier Limited, 2020
52020
reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure prediction
R Kawaguchi, H Kiryu, J Iwakiri, J Sese
BMC bioinformatics 20, 15-24, 2019
42019
Learning single-cell chromatin accessibility profiles using meta-analytic marker genes
RK Kawaguchi, Z Tang, S Fischer, C Rajesh, R Tripathy, PK Koo, J Gillis
Briefings in Bioinformatics 24 (1), bbac541, 2023
22023
Exploiting marker genes for robust classification and characterization of single-cell chromatin accessibility
RK Kawaguchi, Z Tang, S Fischer, R Tripathy, PK Koo, J Gillis
BioRxiv, 2021.04. 01.438068, 2021
22021
Rna structure prediction
RK Kawaguchi, J Iwakiri
Humana Press, 2023
12023
Development of fine-tuning method of MR images of gliomas to normalize image differences among facilities
S Takahashi, M Takahashi, M Kinoshita, M Miyake, R Kawaguchi, ...
CANCER SCIENCE 112, 950-950, 2021
12021
A feedback amplifier circuit with Notch and E2A orchestrates T-cell fate and suppresses the innate lymphoid cell lineages during thymic ontogeny
K Miyazaki, K Horie, H Watanabe, R Hidaka, R Hayashi, N Hayatsu, ...
Genes & Development, 2025
2025
Concentration-dependent formation of intersegment interactions in viral droplets of influenza A virus infected cells
N Takizawa, K Higashi, RK Kawaguchi, Y Gotoh, T Hayashi, K Kurokawa
bioRxiv, 2024.09. 29.615319, 2024
2024
RNAelem: an algorithm for discovering sequence-structure motifs in RNA bound by RNA-binding proteins
H Miyake, RK Kawaguchi, H Kiryu
Bioinformatics Advances 4 (1), vbae144, 2024
2024
Correction to: RNA Structure Prediction
RK Kawaguchi, J Iwakiri
RNA Structure Prediction, C1-C1, 2023
2023
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