| Allostery: an overview of its history, concepts, methods, and applications J Liu, R Nussinov PLoS computational biology 12 (6), e1004966, 2016 | 283 | 2016 |
| Dynamic binding mode of a Synaptotagmin-1–SNARE complex in solution KD Brewer, T Bacaj, A Cavalli, C Camilloni, JD Swarbrick, J Liu, A Zhou, ... Nature structural & molecular biology 22 (7), 555-564, 2015 | 158 | 2015 |
| Principles of allosteric interactions in cell signaling R Nussinov, CJ Tsai, J Liu Journal of the American Chemical Society 136 (51), 17692-17701, 2014 | 156 | 2014 |
| Cas9-catalyzed DNA cleavage generates staggered ends: evidence from molecular dynamics simulations Z Zuo, J Liu Scientific reports 6 (1), 37584, 2016 | 136 | 2016 |
| A quick route to multiple highly potent SARS‐CoV‐2 main protease inhibitors KS Yang, XR Ma, Y Ma, YR Alugubelli, DA Scott, EC Vatansever, ... ChemMedChem 16 (6), 942-948, 2021 | 122 | 2021 |
| A comparison of acetyl-and methoxycarbonylnitrenes by computational methods and a laser flash photolysis study of benzoylnitrene J Liu, S Mandel, CM Hadad, MS Platz The Journal of Organic Chemistry 69 (25), 8583-8593, 2004 | 103 | 2004 |
| A genetically encoded, phage‐displayed cyclic‐peptide library XS Wang, PHC Chen, JT Hampton, JM Tharp, CA Reed, SK Das, ... Angewandte Chemie 131 (44), 16051-16056, 2019 | 96 | 2019 |
| Allosteric effects in the marginally stable von Hippel–Lindau tumor suppressor protein and allostery-based rescue mutant design J Liu, R Nussinov Proceedings of the National Academy of Sciences 105 (3), 901-906, 2008 | 92 | 2008 |
| Surface complexes of phthalic acid at the hematite/water interface YS Hwang, J Liu, JJ Lenhart, CM Hadad Journal of colloid and interface science 307 (1), 124-134, 2007 | 81 | 2007 |
| Structure and dynamics of Cas9 HNH domain catalytic state Z Zuo, J Liu Scientific reports 7 (1), 17271, 2017 | 74 | 2017 |
| The mechanism of ubiquitination in the cullin-RING E3 ligase machinery: conformational control of substrate orientation J Liu, R Nussinov PLoS computational biology 5 (10), e1000527, 2009 | 68 | 2009 |
| Flexible cullins in cullin-RING E3 ligases allosterically regulate ubiquitination J Liu, R Nussinov Journal of Biological Chemistry 286 (47), 40934-40942, 2011 | 61 | 2011 |
| The reaction of triplet nitrenes with oxygen: a computational study J Liu, CM Hadad, MS Platz Organic Letters 7 (4), 549-552, 2005 | 52 | 2005 |
| Energetic redistribution in allostery to execute protein function J Liu, R Nussinov Proceedings of the National Academy of Sciences 114 (29), 7480-7482, 2017 | 49 | 2017 |
| 2D SMARTCyp reactivity-based site of metabolism prediction for major drug-metabolizing cytochrome P450 enzymes R Liu, J Liu, G Tawa, A Wallqvist Journal of chemical information and modeling 52 (6), 1698-1712, 2012 | 46 | 2012 |
| Identifying cytochrome P450 functional networks and their allosteric regulatory elements J Liu, GJ Tawa, A Wallqvist PloS one 8 (12), e81980, 2013 | 45 | 2013 |
| Molecular dynamics reveal the essential role of linker motions in the function of Cullin–RING E3 ligases J Liu, R Nussinov Journal of molecular biology 396 (5), 1508-1523, 2010 | 45 | 2010 |
| Rigid residue scan simulations systematically reveal residue entropic roles in protein allostery R Kalescky, H Zhou, J Liu, P Tao PLoS computational biology 12 (4), e1004893, 2016 | 41 | 2016 |
| The role of allostery in the ubiquitin–proteasome system J Liu, R Nussinov Critical reviews in biochemistry and molecular biology 48 (2), 89-97, 2013 | 39 | 2013 |
| Allosteric regulation of CRISPR-Cas9 for DNA-targeting and cleavage Z Zuo, J Liu Current opinion in structural biology 62, 166-174, 2020 | 37 | 2020 |
