| Human leukocyte antigen susceptibility map for severe acute respiratory syndrome coronavirus 2 A Nguyen, JK David, SK Maden, MA Wood, BR Weeder, A Nellore, ... Journal of virology 94 (13), 10.1128/jvi. 00510-20, 2020 | 631 | 2020 |
| Population-level distribution and putative immunogenicity of cancer neoepitopes MA Wood, M Paralkar, MP Paralkar, A Nguyen, AJ Struck, K Ellrott, ... BMC cancer 18, 1-15, 2018 | 39 | 2018 |
| neoepiscope improves neoepitope prediction with multivariant phasing MA Wood, A Nguyen, AJ Struck, K Ellrott, A Nellore, RF Thompson Bioinformatics 36 (3), 713-720, 2020 | 29 | 2020 |
| Human leukocyte antigen susceptibility map for SARS-CoV-2 [published online ahead of print April 17, 2020] A Nguyen, JK David, SK Maden J Virol 510, 20, 0 | 14 | |
| An invertible transform for efficient string matching in labeled digraphs A Nellore, A Nguyen, RF Thompson arXiv preprint arXiv:1905.03424, 2019 | 7 | 2019 |
| HLA susceptibility map for severe acute respiratory syndrome coronavirus 2 A Nguyen, JK David, SK Maden J Virol 94, e00510-20, 2020 | 6 | 2020 |
| Minimal observed impact of HLA genotype on hospitalization and severity of SARS‐CoV‐2 infection A Nguyen, T Yusufali, JA Hollenbach, A Nellore, RF Thompson Hla 99 (6), 607-613, 2022 | 4 | 2022 |
| Discordant results among major histocompatibility complex binding affinity prediction tools A Nguyen, A Nellore, RF Thompson F1000Research 12, 617, 2023 | 3 | 2023 |
| A rigorous benchmarking of alignment-based HLA callers for RNA-seq data D Yu, R Ayyala, S Mangul | 2 | 2023 |
| Discordant results among MHC binding affinity prediction tools A Nguyen, A Nellore, RF Thompson bioRxiv, 2022.12. 04.518984, 2022 | 2 | 2022 |
| Human leukocyte antigen susceptibility map for SARS-CoV-2 (preprint) A Nguyen, JK David, SK Maden, MA Wood, BR Weeder, A Nellore, ... medRxiv, 2020 | 2 | 2020 |
| Analysis of model organism viability through an interspecies pathway comparison pipeline using the dynamic impact approach A Nguyen, M Bionaz bioRxiv, 2019.12. 18.448985, 2019 | 1 | 2019 |
| A rigorous benchmarking of alignment-based HLA typing algorithms for RNA-seq data D Yu, R Ayyala, SH Sadek, L Chittampalli, H Farooq, J Jung, A Al Nahid, ... bioRxiv, 2023.05. 22.541750, 2024 | | 2024 |
| Discordant results among major histocompatibility complex binding affinity prediction tools [version 1; peer review A Nguyen, A Nellore, RF Thompson | | 2023 |
| Precision Medicine in Renal Transplantation: Structural Biology of HLA Defines Allelic Binding of Cardinal Pathogenic Viruses in Transplantation KR Sherwood, A Nguyen, J Tran, O Gunther, A Nellore, R Thompson, ... AMERICAN JOURNAL OF TRANSPLANTATION 21, 444-444, 2021 | | 2021 |
| Application and Assessment of Peptide-MHC Binding Affinity Prediction: A Dissertation A Nguyen Oregon Health & Science University, 2020 | | 2020 |
| A multidimensional analog to the Burrows-Wheeler transform A Nellore, A Nguyen, RF Thompson Elsevier (Singapore) Pte Ltd, 2019 | | 2019 |
