| The effect of rare alleles on estimated genomic relationships from whole genome sequence data SE Eynard, JJ Windig, G Leroy, R van Binsbergen, MPL Calus BMC genetics 16, 1-12, 2015 | 50 | 2015 |
| Whole-genome sequence data uncover loss of genetic diversity due to selection SE Eynard, JJ Windig, SJ Hiemstra, MPL Calus Genetics Selection Evolution 48, 1-13, 2016 | 44 | 2016 |
| Descriptive analysis of the Varroa non-reproduction trait in honey bee colonies and association with other traits related to Varroa resistance SE Eynard, C Sann, B Basso, AL Guirao, Y Le Conte, B Servin, L Tison, ... Insects 11 (8), 492, 2020 | 29 | 2020 |
| The impact of using old germplasm on genetic merit and diversity—A cattle breed case study SE Eynard, JJ Windig, I Hulsegge, SJ Hiemstra, MPL Calus Journal of animal breeding and genetics 135 (4), 311-322, 2018 | 24 | 2018 |
| Which individuals to choose to update the reference population? Minimizing the loss of genetic diversity in animal genomic selection programs SE Eynard, P Croiseau, D Laloë, S Fritz, MPL Calus, G Restoux G3: Genes, Genomes, Genetics 8 (1), 113-121, 2018 | 24 | 2018 |
| Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones D Wragg, SE Eynard, B Basso, K Canale‐Tabet, E Labarthe, O Bouchez, ... Molecular Ecology Resources 22 (8), 3068-3086, 2022 | 16 | 2022 |
| Identification of quantitative trait loci associated with calmness and gentleness in honey bees using whole‐genome sequences M Guichard, B Dainat, S Eynard, A Vignal, B Servin, ... Animal genetics 52 (4), 472-481, 2021 | 13 | 2021 |
| Reconstructing queen genotypes by pool sequencing colonies in eusocial insects: Statistical Methods and their application to honeybee SE Eynard, A Vignal, B Basso, K Canale‐Tabet, Y Le Conte, A Decourtye, ... Molecular Ecology Resources 22 (8), 3035-3048, 2022 | 9 | 2022 |
| Empowering bioinformatics communities with Nextflow and nf-core BE Langer, A Amaral, MO Baudement, F Bonath, M Charles, PK Chitneedi, ... bioRxiv, 2024.05. 10.592912, 2024 | 5 | 2024 |
| Identification of runs of homozygosity in Western honey bees (Apis mellifera) using whole‐genome sequencing data AI Gmel, M Guichard, B Dainat, GR Williams, S Eynard, A Vignal, B Servin, ... Ecology and Evolution 13 (1), e9723, 2023 | 5 | 2023 |
| Two quantitative trait loci are associated with recapping of Varroa destructor‐infested brood cells in Apis mellifera mellifera M Guichard, B Dainat, S Eynard, A Vignal, B Servin, ... Animal genetics 53 (1), 156-160, 2022 | 5 | 2022 |
| Using genomic information to conserve genetic diversity in livestock SE Eynard Wageningen University, 2018 | 4 | 2018 |
| The Genetic Differentiation of Common Toads on UK Farmland: The Effect of Straight-Line (Euclidean) Distance and Isolation by Barriers in a Heterogeneous Environment DW Macdonald, RD Salazar, SE Eynard, A Rogers, RS Coles, ... Journal of herpetology 54 (1), 118-124, 2020 | 3 | 2020 |
| The black honey bee genome: insights on specific structural elements and a first step towards pangenomes SE Eynard, C Klopp, K Canale-Tabet, W Marande, C Vandecasteele, ... Genetics Selection Evolution 56 (1), 51, 2024 | 1 | 2024 |
| Sequence-based genome-wide association studies reveal the polygenic architecture of Varroa destructor resistance in Western honey bees Apis mellifera SE Eynard, F Mondet, B Basso, O Bouchez, T Bulach, Y Le Conte, ... bioRxiv, 2024.02. 16.580755, 2024 | 1 | 2024 |
| From group to individual-Genotyping by pool sequencing eusocial colonies SE Eynard, A Vignal, B Basso, Y Le Conte, A Decourtye, L Genestout, ... bioRxiv, 2021.11. 08.467442, 2021 | 1 | 2021 |
| The value of conserved samples in gene banks for animal breeding in the MRIJ cattle breed SE Eynard, MPL Calus, B Hulsegge, SJ Hiemstra, JJ Windig World Congress of Genetics Applied to Livestock Production 11, 2018 | 1 | 2018 |
| The use of whole genome sequence data to estimate genetic relationships including rare alleles information SE Eynard, JJ Windig, G Leroy, E Verrier, SJ Hiemstra, R van Binsbergen, ... World Congress of Genetics Applied to Livestock Production 10, 2014 | 1 | 2014 |
| Sequence‐Based Multi Ancestry Association Study Reveals the Polygenic Architecture of Varroa destructor Resistance in the Honeybee Apis mellifera SE Eynard, F Mondet, B Basso, O Bouchez, Y Le Conte, B Dainat, ... Molecular Ecology, e17637, 2024 | | 2024 |
| Inferring long-term and short-term determinants of genetic diversity in honey bees: Beekeeping impact and conservation strategies T Leroy, P Faux, B Basso, S Eynard, D Wragg, A Vignal Molecular Biology and Evolution 41 (12), msae249, 2024 | | 2024 |
