Geoffrey J Barton

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Christian ColeReader (Professor) - University of DundeeVerified email at dundee.ac.uk
James B ProcterCollege of Life Sciences, University of Dundee.Verified email at dundee.ac.uk
David MA MartinSenior Lecturer in Bioinformatics, University of DundeeVerified email at dundee.ac.uk
Dr N SchurchBiomathematics and Statistics ScotlandVerified email at bioss.ac.uk
Michele ClampHarvard UniversityVerified email at micheleclamp.com
Rob RussellProfessor of Protein Evolution, BioQuant/BZH, Heidelberg University, GermanyVerified email at bioquant.uni-heidelberg.de
James CuffOffice of Research Computing and Data @ MITVerified email at mit.edu
Michelle S ScottDepartment of Biochemistry and Functional Genomics, Université de SherbrookeVerified email at usherbrooke.ca
M SternbergImperial College LondonVerified email at imperial.ac.uk
Marek GierlińskiUniversity of DundeeVerified email at dundee.ac.uk
Angus LamondUniversity of DundeeVerified email at dundee.ac.uk
Alexander SherstnevPhilips, Senior Consultant - Data Science and Data AnalyticsVerified email at philips.com
Tom Owen-HughesUniversity of DundeeVerified email at dundee.ac.uk
Pietà SchofieldUniversity of LiverpoolVerified email at liverpool.ac.uk
Stuart A. MacGowanSenior Bioinformatics Scientist, School of Life Sciences, Dundee UniversityVerified email at dundee.ac.uk
Asim SiddiquiSeerVerified email at seer.bio
Steve SearleNo current affiliationVerified email at sanger.ac.uk
Matthew T. ParkerMax Planck institute for plant breeding researchVerified email at mpipz.mpg.de
Diego Miranda-Saavedra[email protected]Verified email at ifrec.osaka-u.ac.jp
Ian OvertonReader (Associate Professor) of Bioinformatics, Queen's University BelfastVerified email at qub.ac.uk

Geoffrey J Barton

Professor of Bioinformatics, University of Dundee

Verified email at dundee.ac.uk - Homepage

Bioinformatics protein structure transcriptomics genomics


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Jalview Version 2—a multiple sequence alignment editor and analysis workbench AM Waterhouse, JB Procter, DMA Martin, M Clamp, GJ Barton Bioinformatics 25 (9), 1189-1191, 2009	10346	2009
JPred4: a protein secondary structure prediction server A Drozdetskiy, C Cole, J Procter, GJ Barton Nucleic acids research 43 (W1), W389-W394, 2015	2004	2015
The jalview java alignment editor M Clamp, J Cuff, SM Searle, GJ Barton Bioinformatics 20 (3), 426-427, 2004	1867	2004
The Jpred 3 secondary structure prediction server C Cole, JD Barber, GJ Barton Nucleic acids research 36 (suppl_2), W197-W201, 2008	1833	2008
ALSCRIPT: a tool to format multiple sequence alignments GJ Barton Protein Engineering Design and Selection 6 (1), 37-40, 1993	1358	1993
JPred: a consensus secondary structure prediction server. JA Cuff, ME Clamp, AS Siddiqui, M Finlay, GJ Barton Bioinformatics (Oxford, England) 14 (10), 892-893, 1998	1305	1998
Application of multiple sequence alignment profiles to improve protein secondary structure prediction JA Cuff, GJ Barton Proteins: Structure, Function, and Bioinformatics 40 (3), 502-511, 2000	1056	2000
Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis JM Carlton, RP Hirt, JC Silva, AL Delcher, M Schatz, Q Zhao, JR Wortman, ... Science 315 (5809), 207-212, 2007	1023	2007
How many biological replicates are needed in an RNA-seq experiment and which differential expression tool should you use? NJ Schurch, P Schofield, M Gierliński, C Cole, A Sherstnev, V Singh, ... Rna 22 (6), 839-851, 2016	941	2016
Evaluation and improvement of multiple sequence methods for protein secondary structure prediction JA Cuff, GJ Barton Proteins: Structure, Function, and Bioinformatics 34 (4), 508-519, 1999	901	1999
Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels RB Russell, GJ Barton Proteins: Structure, Function, and Bioinformatics 14 (2), 309-323, 1993	849	1993
Identification of multiple distinct Snf2 subfamilies with conserved structural motifs A Flaus, DMA Martin, GJ Barton, T Owen-Hughes Nucleic acids research 34 (10), 2887-2905, 2006	833	2006
Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation CD Livingstone, GJ Barton Bioinformatics 9 (6), 745-756, 1993	778	1993
Draft genome of the filarial nematode parasite Brugia malayi E Ghedin, S Wang, D Spiro, E Caler, Q Zhao, J Crabtree, JE Allen, ... Science 317 (5845), 1756-1760, 2007	732	2007
Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs C Cole, A Sobala, C Lu, SR Thatcher, A Bowman, JWS Brown, PJ Green, ... Rna 15 (12), 2147-2160, 2009	695	2009
A strategy for the rapid multiple alignment of protein sequences: confidence levels from tertiary structure comparisons GJ Barton, MJE Sternberg Journal of molecular biology 198 (2), 327-337, 1987	660	1987
Emerging roles of pseudokinases J Boudeau, D Miranda-Saavedra, GJ Barton, DR Alessi Trends in cell biology 16 (9), 443-452, 2006	633	2006
Prediction of protein secondary structure and active sites using the alignment of homologous sequences MJ Zvelebil, GJ Barton, WR Taylor, MJE Sternberg Journal of molecular biology 195 (4), 957-961, 1987	598	1987
System-wide changes to SUMO modifications in response to heat shock F Golebiowski, I Matic, MH Tatham, C Cole, Y Yin, A Nakamura, J Cox, ... Science signaling 2 (72), ra24-ra24, 2009	577	2009
Crystal structure of isopenicillin N synthase is the first from a new structural family of enzymes PL Roach, IJ Clifton, V Fülöp, K Harlos, GJ Barton, J Hajdu, I Andersson, ... Nature 375 (6533), 700-704, 1995	545	1995

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