| The single-cell transcriptional landscape of mammalian organogenesis J Cao, M Spielmann, X Qiu, X Huang, DM Ibrahim, AJ Hill, F Zhang, ... Nature 566 (7745), 496-502, 2019 | 3179 | 2019 |
| Comprehensive single-cell transcriptional profiling of a multicellular organism J Cao, JS Packer, V Ramani, DA Cusanovich, C Huynh, R Daza, X Qiu, ... Science 357 (6352), 661-667, 2017 | 1450 | 2017 |
| Joint profiling of chromatin accessibility and gene expression in thousands of single cells J Cao, DA Cusanovich, V Ramani, D Aghamirzaie, HA Pliner, AJ Hill, ... Science 361 (6409), 1380-1385, 2018 | 855 | 2018 |
| A human cell atlas of fetal gene expression J Cao, DR O’day, HA Pliner, PD Kingsley, M Deng, RM Daza, MA Zager, ... Science 370 (6518), eaba7721, 2020 | 623 | 2020 |
| A human cell atlas of fetal chromatin accessibility S Domcke, AJ Hill, RM Daza, J Cao, DR O’Day, HA Pliner, KA Aldinger, ... Science 370 (6518), eaba7612, 2020 | 359 | 2020 |
| Massively multiplex chemical transcriptomics at single-cell resolution SR Srivatsan, JL McFaline-Figueroa, V Ramani, L Saunders, J Cao, ... Science 367 (6473), 45-51, 2020 | 315 | 2020 |
| Sci-fate characterizes the dynamics of gene expression in single cells J Cao, W Zhou, F Steemers, C Trapnell, J Shendure Nature biotechnology 38 (8), 980-988, 2020 | 130 | 2020 |
| Systematic reconstruction of cellular trajectories across mouse embryogenesis C Qiu, J Cao, BK Martin, T Li, IC Welsh, S Srivatsan, X Huang, D Calderon, ... Nature genetics 54 (3), 328-341, 2022 | 127 | 2022 |
| Suppression of the HSF 1‐mediated proteotoxic stress response by the metabolic stress sensor AMPK S Dai, Z Tang, J Cao, W Zhou, H Li, S Sampson, C Dai The EMBO journal 34 (3), 275-293, 2015 | 113 | 2015 |
| Structural and kinetic analysis of the COP9-Signalosome activation and the cullin-RING ubiquitin ligase deneddylation cycle R Mosadeghi, KM Reichermeier, M Winkler, A Schreiber, JM Reitsma, ... Elife 5, e12102, 2016 | 104 | 2016 |
| HSF1 critically attunes proteotoxic stress sensing by mTORC1 to combat stress and promote growth KH Su, J Cao, Z Tang, S Dai, Y He, SB Sampson, IJ Benjamin, C Dai Nature cell biology 18 (5), 527-539, 2016 | 102 | 2016 |
| Proteotoxic stress of cancer: implication of the heat‐shock response in oncogenesis C Dai, S Dai, J Cao Journal of cellular physiology 227 (8), 2982-2987, 2012 | 94 | 2012 |
| Optimized single-nucleus transcriptional profiling by combinatorial indexing BK Martin, C Qiu, E Nichols, M Phung, R Green-Gladden, S Srivatsan, ... Nature protocols 18 (1), 188-207, 2023 | 69 | 2023 |
| A single-cell time-lapse of mouse prenatal development from gastrula to birth C Qiu, BK Martin, IC Welsh, RM Daza, TM Le, X Huang, EK Nichols, ... Nature 626 (8001), 1084-1093, 2024 | 47 | 2024 |
| A global view of aging and Alzheimer’s pathogenesis-associated cell population dynamics and molecular signatures in human and mouse brains A Sziraki, Z Lu, J Lee, G Banyai, S Anderson, A Abdulraouf, E Metzner, ... Nature Genetics 55 (12), 2104-2116, 2023 | 39 | 2023 |
| Single-cell transcriptomics suggest distinct upstream drivers of IL-17A/F in hidradenitis versus psoriasis J Kim, J Lee, X Li, HS Lee, K Kim, V Chaparala, W Murphy, W Zhou, J Cao, ... Journal of Allergy and Clinical Immunology 152 (3), 656-666, 2023 | 31 | 2023 |
| Dissecting key regulators of transcriptome kinetics through scalable single-cell RNA profiling of pooled CRISPR screens Z Xu, A Sziraki, J Lee, W Zhou, J Cao Nature Biotechnology 42 (8), 1218-1223, 2024 | 18 | 2024 |
| Tracking cell-type-specific temporal dynamics in human and mouse brains Z Lu, M Zhang, J Lee, A Sziraki, S Anderson, Z Zhang, Z Xu, W Jiang, ... Cell 186 (20), 4345-4364. e24, 2023 | 17 | 2023 |
| Reversible, tunable epigenetic silencing of TCF1 generates flexibility in the T cell memory decision K Abadie, EC Clark, RM Valanparambil, O Ukogu, W Yang, RM Daza, ... Immunity 57 (2), 271-286. e13, 2024 | 13 | 2024 |
| A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup C Qiu, BK Martin, IC Welsh, RM Daza, TM Le, X Huang, EK Nichols, ... bioRxiv, 2023 | 13 | 2023 |
