| Segment anything model (sam) for digital pathology: Assess zero-shot segmentation on whole slide imaging R Deng, C Cui, Q Liu, T Yao, LW Remedios, S Bao, BA Landman, ... arXiv preprint arXiv:2304.04155, 2023 | 206 | 2023 |
| VoxelEmbed: 3D instance segmentation and tracking with voxel embedding based deep learning M Zhao, Q Liu, A Jha, R Deng, T Yao, A Mahadevan-Jansen, MJ Tyska, ... Machine Learning in Medical Imaging: 12th International Workshop, MLMI 2021 …, 2021 | 112 | 2021 |
| Simtriplet: Simple triplet representation learning with a single gpu Q Liu, PC Louis, Y Lu, A Jha, M Zhao, R Deng, T Yao, JT Roland, H Yang, ... Medical Image Computing and Computer Assisted Intervention–MICCAI 2021: 24th …, 2021 | 44 | 2021 |
| Compound figure separation of biomedical images with side loss T Yao, C Qu, Q Liu, R Deng, Y Tian, J Xu, A Jha, S Bao, M Zhao, AB Fogo, ... Deep Generative Models, and Data Augmentation, Labelling, and Imperfections …, 2021 | 40 | 2021 |
| All-in-sam: from weak annotation to pixel-wise nuclei segmentation with prompt-based finetuning C Cui, R Deng, Q Liu, T Yao, S Bao, LW Remedios, BA Landman, Y Tang, ... Journal of Physics: Conference Series 2722 (1), 012012, 2024 | 36 | 2024 |
| Deep generative models, and data augmentation, labelling, and imperfections T Yao, C Qu, Q Liu, R Deng, Y Tian, J Xu, A Jha, S Bao, M Zhao, A Fogo Deep Generative Models, and Data Augmentation, Labelling, and Imperfections …, 2021 | 25 | 2021 |
| Omni-seg: A scale-aware dynamic network for renal pathological image segmentation R Deng, Q Liu, C Cui, T Yao, J Long, Z Asad, RM Womick, Z Zhu, AB Fogo, ... IEEE Transactions on Biomedical Engineering 70 (9), 2636-2644, 2023 | 23 | 2023 |
| Segment anything model (sam) for digital pathology: Assess zero-shot segmentation on whole slide imaging. arXiv 2023 R Deng, C Cui, Q Liu, T Yao, LW Remedios, S Bao, BA Landman, ... arXiv preprint arXiv:2304.04155, 0 | 12 | |
| Glo-In-One: holistic glomerular detection, segmentation, and lesion characterization with large-scale web image mining T Yao, Y Lu, J Long, A Jha, Z Zhu, Z Asad, H Yang, AB Fogo, Y Huo Journal of Medical Imaging 9 (5), 052408-052408, 2022 | 11 | 2022 |
| A Unified Learning Model for Estimating Fiber Orientation Distribution Functions on Heterogeneous Multi-shell Diffusion-Weighted MRI T Yao, N Newlin, P Kanakaraj, V Nath, LY Cai, K Ramadass, K Schilling, ... International Workshop on Computational Diffusion MRI, 13-22, 2023 | 8 | 2023 |
| Comparing voxel-and feature-wise harmonization of complex graph measures from multiple sites for structural brain network investigation of aging NR Newlin, LY Cai, T Yao, D Archer, KR Pechman, KG Schilling, ... Proceedings of SPIE--the International Society for Optical Engineering 12464 …, 2023 | 8 | 2023 |
| Enhancing thoracic disease detection using chest X-rays from PubMed Central Open Access M Lin, B Hou, S Mishra, T Yao, Y Huo, Q Yang, F Wang, G Shih, Y Peng Computers in biology and medicine 159, 106962, 2023 | 5 | 2023 |
| HoloHisto: end-to-end gigapixel WSI segmentation with 4K resolution sequential tokenization Y Tang, Y He, V Nath, P Guo, R Deng, T Yao, Q Liu, C Cui, M Yin, Z Xu, ... arXiv preprint arXiv:2407.03307, 2024 | 4 | 2024 |
| DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images P Kanakaraj, T Yao, LY Cai, HH Lee, NR Newlin, ME Kim, C Gao, ... Neuroinformatics 22 (2), 193-205, 2024 | 4 | 2024 |
| PrPSeg: Universal Proposition Learning for Panoramic Renal Pathology Segmentation R Deng, Q Liu, C Cui, T Yao, J Yue, J Xiong, L Yu, Y Wu, M Yin, Y Wang, ... Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2024 | 4 | 2024 |
| Deep constrained spherical deconvolution for robust harmonization T Yao, F Rheault, LY Cai, V Nath, Z Asad, N Newlin, C Cui, R Deng, ... Medical Imaging 2023: Image Processing 12464, 177-184, 2023 | 4 | 2023 |
| Spatial pathomics toolkit for quantitative analysis of podocyte nuclei with histology and spatial transcriptomics data in renal pathology J Chen, Y Wang, R Deng, Q Liu, C Cui, T Yao, Y Liu, J Zhong, AB Fogo, ... Medical Imaging 2024: Digital and Computational Pathology 12933, 252-260, 2024 | 3 | 2024 |
| Robust fiber orientation distribution function estimation using deep constrained spherical deconvolution for diffusion-weighted magnetic resonance imaging T Yao, F Rheault, LY Cai, V Nath, Z Asad, N Newlin, C Cui, R Deng, ... Journal of Medical Imaging 11 (1), 014005-014005, 2024 | 3 | 2024 |
| Robust fiber orientation distribution function estimation using deep constrained spherical deconvolution for diffusion-weighted magnetic resonance imaging T Yao, F Rheault, LY Cai, Z Asad, N Newlin, C Cui, R Deng, K Ramadass, ... arXiv preprint arXiv:2306.02900, 2023 | 3 | 2023 |
| Holistic fine-grained global glomerulosclerosis characterization: from detection to unbalanced classification Y Lu, H Yang, Z Asad, Z Zhu, T Yao, J Xu, AB Fogo, Y Huo Journal of Medical Imaging 9 (1), 014005-014005, 2022 | 3 | 2022 |
Yuankai HuoComputer Science, Vanderbilt UniversityVerified email at vanderbilt.edu