| Genome analysis of Bacillus amyloliquefaciens subsp. plantarum UCMB5113: a rhizobacterium that improves plant growth and stress management A Niazi, S Manzoor, S Asari, S Bejai, J Meijer, E Bongcam-Rudloff PLoS One 9 (8), e104651, 2014 | 124 | 2014 |
| tailfindr: alignment-free poly (A) length measurement for Oxford Nanopore RNA and DNA sequencing M Krause, AM Niazi, K Labun, YNT Cleuren, FS Müller, E Valen RNA 25 (10), 1229-1241, 2019 | 87 | 2019 |
| Characterization of the nuclear and cytosolic transcriptomes in human brain tissue reveals new insights into the subcellular distribution of RNA transcripts A Zaghlool, A Niazi, ÅK Björklund, JO Westholm, A Ameur, L Feuk Scientific reports 11 (1), 4076, 2021 | 41 | 2021 |
| Identification of Transmission Routes of Campylobacter and On-Farm Measures to Reduce Campylobacter in Chicken S Frosth, O Karlsson-Lindsjö, A Niazi, LL Fernström, I Hansson Pathogens 9 (5), 363, 2020 | 40 | 2020 |
| Identification of bull semen microbiome by 16S sequencing and possible relationships with fertility A Cojkic, A Niazi, Y Guo, T Hallap, P Padrik, JM Morrell Microorganisms 9 (12), 2431, 2021 | 36 | 2021 |
| Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing O Begik, G Diensthuber, H Liu, A Delgado-Tejedor, C Kontur, AM Niazi, ... Nature Methods 20 (1), 75-85, 2023 | 34 | 2023 |
| Complete genome sequence of a plant associated bacterium Bacillus amyloliquefaciens subsp. plantarum UCMB5033 A Niazi, S Manzoor, S Bejai, J Meijer, E Bongcam-Rudloff Standards in Genomic Sciences 9, 718-725, 2014 | 32 | 2014 |
| Transcriptome analysis of fibroblasts from schizophrenia patients reveals differential expression of schizophrenia-related genes M Etemadikhah, A Niazi, L Wetterberg, L Feuk Scientific Reports 10 (1), 630, 2020 | 31 | 2020 |
| Genome-Guided Analysis of Physiological Capacities of Tepidanaerobacter acetatoxydans Provides Insights into Environmental Adaptations and Syntrophic … B Müller, S Manzoor, A Niazi, E Bongcam-Rudloff, A Schnürer PLoS One 10 (3), e0121237, 2015 | 31 | 2015 |
| LPS-treatment of bovine endometrial epithelial cells causes differential DNA methylation of genes associated with inflammation and endometrial function N Jhamat, A Niazi, Y Guo, M Chanrot, E Ivanova, G Kelsey, ... BMC genomics 21, 1-12, 2020 | 30 | 2020 |
| Differential gene expression in bovine endometrial epithelial cells after challenge with LPS; specific implications for genes involved in embryo maternal interactions Y Guo, T Van Schaik, N Jhamat, A Niazi, M Chanrot, G Charpigny, ... PLoS One 14 (9), e0222081, 2019 | 29 | 2019 |
| Long-read single-molecule RNA structure sequencing using nanopore TT Bizuayehu, K Labun, M Jakubec, K Jefimov, AM Niazi, E Valen Nucleic acids research 50 (20), e120-e120, 2022 | 25 | 2022 |
| Metagenomic analysis of bacteria in stallion semen Z Al-Kass, Y Guo, OV Pettersson, A Niazi, JM Morrell Animal reproduction science 221, 106568, 2020 | 23 | 2020 |
| Expression profiling and in situ screening of circular RNAs in human tissues A Zaghlool, A Ameur, C Wu, JO Westholm, A Niazi, M Manivannan, ... Scientific Reports 8 (1), 16953, 2018 | 23 | 2018 |
| Transcriptome analysis of post-mortem brain tissue reveals up-regulation of the complement cascade in a subgroup of schizophrenia patients E Lindholm Carlström, A Niazi, M Etemadikhah, J Halvardson, S Enroth, ... Genes 12 (8), 1242, 2021 | 18 | 2021 |
| Studies of plant colonisation by closely related Bacillus amyloliquefaciens biocontrol agents using strain specific quantitative PCR assays J Anna, S Bejai, A Niazi, S Manzoor, E Bongcam-Rudloff, J Meijer Antonie Van Leeuwenhoek 106 (5), 2014 | 18 | 2014 |
| Online decoding of object‐based attention using real‐time f MRI AM Niazi, PLC van den Broek, S Klanke, M Barth, M Poel, P Desain, ... European journal of neuroscience 39 (2), 319-329, 2014 | 18 | 2014 |
| Genome sequence of a plant-associated bacterium, Bacillus amyloliquefaciens strain UCMB5036 S Manzoor, A Niazi, S Bejai, J Meijer, E Bongcam-Rudloff Genome announcements 1 (2), 10.1128/genomea. 00111-13, 2013 | 18 | 2013 |
| Draft genome sequence of Clostridium ultunense strain Esp, a syntrophic acetate-oxidizing bacterium S Manzoor, B Müller, A Niazi, E Bongcam-Rudloff, A Schnürer Genome announcements 1 (2), 10.1128/genomea. 00107-13, 2013 | 17 | 2013 |
| Genomic designing for climate smart finger millet DA Odeny, A Niazi, K Tesfaye, D Lule, S Wanyonyi, JS Kunguni Genomic Designing of climate-smart cereal crops, 287-307, 2020 | 16 | 2020 |
Erik Bongcam-RudloffProfessor in Bioinformatics,Swedish University of Agricultural Sciences, SwedenVerified email at slu.se