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Mauricio J. del Razo
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MSM/RD: Coupling Markov state models of molecular kinetics with reaction-diffusion simulations
M Dibak, MJ del Razo, D De Sancho, C Schütte, F Noé
The Journal of chemical physics 148 (21), 214107, 2018
342018
Riemann problems and Jupyter solutions
DI Ketcheson, RJ LeVeque, MJ Del Razo
SIAM, 2020
292020
A probabilistic framework for particle-based reaction–diffusion dynamics using classical Fock space representations
MJ Del Razo, D Frömberg, AV Straube, C Schütte, F Höfling, ...
Letters in Mathematical Physics 112 (3), 49, 2022
252022
Multiscale molecular kinetics by coupling Markov state models and reaction-diffusion dynamics
MJ Del Razo, M Dibak, C Schütte, F Noé
The Journal of Chemical Physics 155 (12), 2021
232021
Independent Markov decomposition: Toward modeling kinetics of biomolecular complexes
T Hempel, MJ Del Razo, CT Lee, BC Taylor, RE Amaro, F Noé
Proceedings of the National Academy of Sciences 118 (31), e2105230118, 2021
192021
Chemical diffusion master equation: Formulations of reaction–diffusion processes on the molecular level
MJ del Razo, S Winkelmann, R Klein, F Höfling
Journal of Mathematical Physics 64 (1), 2023
172023
Grand canonical diffusion-influenced reactions: A stochastic theory with applications to multiscale reaction-diffusion simulations
MJ Del Razo, H Qian, F Noé
The Journal of chemical physics 149 (4), 2018
172018
Coupling particle-based reaction-diffusion simulations with reservoirs mediated by reaction-diffusion pdes
M Kostré, C Schütte, F Noé, MJ Del Razo
Multiscale Modeling & Simulation 19 (4), 1659-1683, 2021
162021
A discrete stochastic formulation for reversible bimolecular reactions via diffusion encounter
MJ Del Razo, H Qian
Communications in Mathematical Sciences 14 (6), 1741-1772, 2015
162015
Computational and in vitro studies of blast-induced blood-brain barrier disruption
MJ Del Razo, Y Morofuji, JS Meabon, BR Huber, ER Peskind, WA Banks, ...
SIAM Journal on Scientific Computing 38 (3), B347-B374, 2016
142016
Computational study of shock waves propagating through air-plastic-water interfaces
MJ Del Razo, RJ LeVeque
Bulletin of the Brazilian Mathematical Society, New Series 47, 685-700, 2016
112016
Fluorescence correlation spectroscopy and nonlinear stochastic reaction–diffusion
MJ Del Razo, W Pan, H Qian, G Lin
The Journal of Physical Chemistry B 118 (25), 7037-7046, 2014
82014
Numerical methods for interface coupling of compressible and almost incompressible media
MJ Del Razo, RJ LeVeque
SIAM Journal on Scientific Computing 39 (3), B486-B507, 2017
72017
Open reaction-diffusion systems: bridging probabilistic theory across scales
MJ del Razo
arXiv preprint arXiv:2404.07119, 2024
32024
Dynamics of systems with varying number of particles: from Liouville equations to general master equations for open systems
M del Razo, L Delle Site
SciPost Physics 18 (1), 001, 2025
22025
Data-driven dynamical coarse-graining for condensed matter systems
MJ Del Razo, D Crommelin, PG Bolhuis
The Journal of Chemical Physics 160 (2), 2024
22024
Risk aversion promotes cooperation
J Armas, W Merbis, J Meylahn, SR Rad, MJ del Razo
arXiv preprint arXiv:2306.05971, 2023
22023
Solution formula for the general birth-death chemical diffusion master equation
A Lanconelli, BT Perçin, MJ del Razo
arXiv preprint arXiv:2302.10700, 2023
22023
Field theories and quantum methods for stochastic reaction-diffusion systems
MJ del Razo, T Lamma, W Merbis
arXiv preprint arXiv:2409.13377, 2024
12024
Independent Markov decomposition
T Hempel, MJ del Razo, CT Lee, BC Taylor, RE Amaro, F Noé
Proceedings of the National Academy of Sciences of the United States of …, 2021
12021
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