| Modeling immunity with Rosetta: methods for antibody and antigen design CT Schoeder, S Schmitz, J Adolf-Bryfogle, AM Sevy, JA Finn, MF Sauer, ... Biochemistry 60 (11), 825-846, 2021 | 49 | 2021 |
| Probing biophysical sequence constraints within the transmembrane domains of rhodopsin by deep mutational scanning WD Penn, AG McKee, CP Kuntz, H Woods, V Nash, TC Gruenhagen, ... Science advances 6 (10), eaay7505, 2020 | 39 | 2020 |
| Upgraded molecular models of the human KCNQ1 potassium channel G Kuenze, AM Duran, H Woods, KR Brewer, EF McDonald, CG Vanoye, ... PloS one 14 (9), e0220415, 2019 | 28 | 2019 |
| Allosteric mechanism for KCNE1 modulation of KCNQ1 potassium channel activation G Kuenze, CG Vanoye, RR Desai, S Adusumilli, KR Brewer, H Woods, ... Elife 9, e57680, 2020 | 26 | 2020 |
| Structural Comparative Modeling of Multi-Domain F508del CFTR EF McDonald, H Woods, ST Smith, M Kim, CT Schoeder, L Plate, J Meiler Biomolecules 12 (3), 471, 2022 | 17 | 2022 |
| Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks J Koehler Leman, S Lyskov, SM Lewis, J Adolf-Bryfogle, RF Alford, ... Nature communications 12 (1), 6947, 2021 | 17 | 2021 |
| Systematic profiling of temperature-and retinal-sensitive rhodopsin variants by deep mutational scanning AG McKee, CP Kuntz, JT Ortega, H Woods, V Most, FJ Roushar, J Meiler, ... Journal of Biological Chemistry 297 (6), 2021 | 12 | 2021 |
| Molecular basis for variations in the sensitivity of pathogenic rhodopsin variants to 9-cis-retinal FJ Roushar, AG McKee, CP Kuntz, JT Ortega, WD Penn, H Woods, ... Journal of Biological Chemistry 298 (8), 2022 | 11 | 2022 |
| Computational modeling and prediction of deletion mutants H Woods, DL Schiano, JI Aguirre, KV Ledwitch, EF McDonald, M Voehler, ... Structure 31 (6), 713-723. e3, 2023 | 9 | 2023 |
| Probing biophysical sequence constraints within the transmembrane domains of rhodopsin by deep mutational scanning. Sci Adv. 2020; 6 (10): eaay7505 WD Penn, AG McKee, CP Kuntz, H Woods, V Nash, TC Gruenhagen Epub 2020/03/18. doi: 10.1126/sciadv. aay7505. PubMed PMID: 32181350, 0 | 6 | |
| Modeling membrane geometries implicitly in Rosetta H Woods, JK Leman, J Meiler Protein Science 33 (3), e4908, 2024 | 3 | 2024 |
| Towards generalizable predictions for G protein-coupled receptor variant expression CP Kuntz, H Woods, AG McKee, NB Zelt, JL Mendenhall, J Meiler, ... Biophysical Journal 121 (14), 2712-2720, 2022 | 2 | 2022 |
| BPS2025-RSV fusion protein conformation transition pathway from prefusion to postfusion H Woods, M Moradi Biophysical Journal 124 (3), 397a, 2025 | | 2025 |
| Divergent folding-mediated epistasis among unstable membrane protein variants LM Chamness, CP Kuntz, AG McKee, WD Penn, CM Hemmerich, ... eLife 12, RP92406, 2024 | | 2024 |
| Development of Frameworks for Computational Protein Structure Prediction Applications Challenged By Limited Training Data H Woods Vanderbilt University, 2023 | | 2023 |
| Predicting Mutational Impact on Membrane Protein Stability and its Implications for Long QT Syndrome K Brewer, H Woods, H Huang, G Kuenze, J Meiler, C Sanders PROTEIN SCIENCE 32, 2023 | | 2023 |
| Structural Comparative Modeling of Multi-Domain F508del CFTR. Biomolecules 2022, 12, 471 EF McDonald, H Woods, ST Smith, M Kim, CT Schoeder, L Plate, J Meiler s Note: MDPI stays neutral with regard to jurisdictional claims in published …, 2022 | | 2022 |
| Towards Generalizable Predictions for the Effects of Mutations on G-Protein Coupled Receptor Expression CP Kuntz, H Woods, AG McKee, NB Zelt, JL Mendenhall, J Meiler, ... bioRxiv, 2021.12. 28.474371, 2021 | | 2021 |
| Structural comparative modeling of multi-domain ΔF508 CFTR EF McDonald, H Woods, ST Smith, M Kim, CT Schoeder, L Plate, J Meiler bioRxiv, 2021.11. 17.468921, 2021 | | 2021 |
| Design of a Chimeric KCNQ1 Channel for E. coli Expression and Studies of LQTS Variants KR Brewer, H Woods, G Kuenze, CR Sanders Biophysical Journal 120 (3), 241a, 2021 | | 2021 |