| Understanding multicellular function and disease with human tissue-specific networks CS Greene, A Krishnan, AK Wong, E Ricciotti, RA Zelaya, ... Nature genetics 47 (6), 569-576, 2015 | 925 | 2015 |
| Single-cell transcriptional profiles in human skeletal muscle AB Rubenstein, GR Smith, U Raue, G Begue, K Minchev, F Ruf-Zamojski, ... Scientific reports 10 (1), 229, 2020 | 258 | 2020 |
| Molecular transducers of physical activity consortium (MoTrPAC): mapping the dynamic responses to exercise JA Sanford, CD Nogiec, ME Lindholm, JN Adkins, D Amar, S Dasari, ... Cell 181 (7), 1464-1474, 2020 | 219 | 2020 |
| Astrocytic TYMP and VEGFA drive blood–brain barrier opening in inflammatory central nervous system lesions C Chapouly, A Tadesse Argaw, S Horng, K Castro, J Zhang, L Asp, H Loo, ... Brain 138 (6), 1548-1567, 2015 | 183 | 2015 |
| Comparative analysis of methods for representing and searching for transcription factor binding sites R Osada, E Zaslavsky, M Singh Bioinformatics 20 (18), 3516-3525, 2004 | 117 | 2004 |
| CellCODE: a robust latent variable approach to differential expression analysis for heterogeneous cell populations M Chikina, E Zaslavsky, SC Sealfon Bioinformatics 31 (10), 1584-1591, 2015 | 114 | 2015 |
| Pathway-level information extractor (PLIER) for gene expression data W Mao, E Zaslavsky, BM Hartmann, SC Sealfon, M Chikina Nature methods 16 (7), 607-610, 2019 | 101 | 2019 |
| Innate immune response to influenza virus at single-cell resolution in human epithelial cells revealed paracrine induction of interferon lambda 1 I Ramos, G Smith, F Ruf-Zamojski, C Martínez-Romero, M Fribourg, ... Journal of virology 93 (20), 10.1128/jvi. 00559-19, 2019 | 96 | 2019 |
| Analysis of chromatin accessibility uncovers TEAD1 as a regulator of migration in human glioblastoma J Tome-Garcia, P Erfani, G Nudelman, AM Tsankov, I Katsyv, R Tejero, ... Nature communications 9 (1), 4020, 2018 | 83 | 2018 |
| The construction and use of log-odds substitution scores for multiple sequence alignment SF Altschul, JC Wootton, E Zaslavsky, YK Yu PLoS computational biology 6 (7), e1000852, 2010 | 82 | 2010 |
| High resolution annotation of zebrafish transcriptome using long-read sequencing G Nudelman, A Frasca, B Kent, KC Sadler, SC Sealfon, MJ Walsh, ... Genome Research 28 (9), 1415-1425, 2018 | 73 | 2018 |
| Interactive big data resource to elucidate human immune pathways and diseases D Gorenshteyn, E Zaslavsky, M Fribourg, CY Park, AK Wong, A Tadych, ... Immunity 43 (3), 605-614, 2015 | 67 | 2015 |
| Anti-invasive efficacy and survival benefit of the YAP-TEAD inhibitor verteporfin in preclinical glioblastoma models AM Barrette, H Ronk, T Joshi, Z Mussa, M Mehrotra, A Bouras, ... Neuro-oncology 24 (5), 694-707, 2022 | 63 | 2022 |
| Antiviral response dictated by choreographed cascade of transcription factors E Zaslavsky, U Hershberg, J Seto, AM Pham, S Marquez, JL Duke, ... The Journal of Immunology 184 (6), 2908-2917, 2010 | 60 | 2010 |
| Pandemic H1N1 influenza A viruses suppress immunogenic RIPK3-driven dendritic cell death BM Hartmann, RA Albrecht, E Zaslavsky, G Nudelman, H Pincas, ... Nature communications 8 (1), 1931, 2017 | 51 | 2017 |
| Single nucleus transcriptome and chromatin accessibility of postmortem human pituitaries reveal diverse stem cell regulatory mechanisms Z Zhang, M Zamojski, GR Smith, TL Willis, V Yianni, N Mendelev, ... Cell reports 38 (10), 2022 | 47 | 2022 |
| The transcriptional activator Krüppel-like factor-6 is required for CNS myelination BM Laitman, L Asp, JN Mariani, J Zhang, J Liu, S Sawai, C Chapouly, ... PLoS biology 14 (5), e1002467, 2016 | 47 | 2016 |
| A combinatorial optimization approach for diverse motif finding applications E Zaslavsky, M Singh Algorithms for Molecular Biology 1, 1-13, 2006 | 46 | 2006 |
| Human dendritic cell response signatures distinguish 1918, pandemic, and seasonal H1N1 influenza viruses BM Hartmann, J Thakar, RA Albrecht, S Avey, E Zaslavsky, N Marjanovic, ... Journal of virology 89 (20), 10190-10205, 2015 | 39 | 2015 |
| Asymptomatic SARS-CoV-2 infection is associated with higher levels of serum IL-17C, matrix metalloproteinase 10 and fibroblast growth factors than mild symptomatic COVID-19 A Soares-Schanoski, N Sauerwald, CW Goforth, S Periasamy, DL Weir, ... Frontiers in Immunology 13, 821730, 2022 | 37 | 2022 |
Stuart SealfonIcahn School of Medicine at Mount SinaiVerified email at mssm.edu
