Ali Shilatifard

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Marc MorganVerified email at path.ox.ac.uk
Michael WashburnDepartment of Cancer Biology, University of Kansas Medical CenterVerified email at kumc.edu
Jack GreenblattProfessor, University of TorontoVerified email at utoronto.ca
Nevan KroganUniversity of California-San FranciscoVerified email at ucsf.edu
Mark JohnstonProf Emeritus, Biochem&Mol.Genetics, U of Colorado SOM; formerly Prof of Genetics, Washington UnivVerified email at ucdenver.edu
Deqing HuTianjin Medical University, Northwestern University and Stowers Institute for Medical ResearchVerified email at tmu.edu.cn
Alexander S. Garruss (Garrett)Harvard UniversityVerified email at fas.harvard.edu
Kaiwei LiangWuhan University, Northwestern University, Stowers InstituteVerified email at whu.edu.cn
sukesh bhaumikAssociate ProfessorVerified email at siumed.edu
Danny Reinberg, Ph.D.Principal Investigator, Prof. of Biochemistry, HHMI/NYU Langone School of Med.Verified email at nyumc.org
Gerard CagneyUniversity College DublinVerified email at ucd.ie
Madelaine Marchin GogolManager, Computational Biology, Stowers InstituteVerified email at stowers.org
Yi ZhangHHMI, Harvard Medical School & Boston Children's HospitalVerified email at genetics.med.harvard.edu
Jeffrey HaugStowers Institute for Medical Research Verified email at stowers.org
Chris SeidelStowers InstituteVerified email at stowers.org
William S. LaneHarvard University, MSPRL Director (Mass Spectrometry & Proteomics Resource Lab)Verified email at harvard.edu
N. C. Tolga EmreBoğaziçi University, Istanbul/TurkeyVerified email at boun.edu.tr
Dale DorsettProfessor of Biochemistry and Molecular Biology, Saint Louis UniversityVerified email at slu.edu
Charles BooneProfessor, Donnelly Centre, University of TorontoVerified email at utoronto.ca
David BAILLATAssistant Professor, UTMB, Dept. of Biochemistry and Molecular Biology, Galveston, TX.Verified email at utmb.edu

Ali Shilatifard

Professor and Chairman of Biochemistry, Director of Simpson Querrey Institute for Epigenetics

Verified email at northwestern.edu - Homepage

Epigenetics Chromatin and Transcription Gene Expression


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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae NJ Krogan, G Cagney, H Yu, G Zhong, X Guo, A Ignatchenko, J Li, S Pu, ... Nature 440 (7084), 637-643, 2006	3511	2006
An operational definition of epigenetics SL Berger, T Kouzarides, R Shiekhattar, A Shilatifard Genes & development 23 (7), 781-783, 2009	2586	2009
Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression A Shilatifard Annu. Rev. Biochem. 75 (1), 243-269, 2006	1449	2006
New nomenclature for chromatin-modifying enzymes CD Allis, SL Berger, J Cote, S Dent, T Jenuwien, T Kouzarides, L Pillus, ... Cell 131 (4), 633-636, 2007	1214	2007
The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis A Shilatifard Annual review of biochemistry 81 (1), 65-95, 2012	1187	2012
Single-cell transcriptomic analysis of human lung provides insights into the pathobiology of pulmonary fibrosis PA Reyfman, JM Walter, N Joshi, KR Anekalla, AC McQuattie-Pimentel, ... American journal of respiratory and critical care medicine 199 (12), 1517-1536, 2019	1156	2019
Monocyte-derived alveolar macrophages drive lung fibrosis and persist in the lung over the life span AV Misharin, L Morales-Nebreda, PA Reyfman, CM Cuda, JM Walter, ... Journal of Experimental Medicine 214 (8), 2387-2404, 2017	1010	2017
The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation NJ Krogan, J Dover, A Wood, J Schneider, J Heidt, MA Boateng, K Dean, ... Molecular cell 11 (3), 721-729, 2003	919	2003
Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II NJ Krogan, M Kim, A Tong, A Golshani, G Cagney, DP Richards, ... Molecular and cellular biology, 2003	895	2003
Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8 KW Henry, A Wyce, WS Lo, LJ Duggan, NCT Emre, CF Kao, L Pillus, ... Genes & development 17 (21), 2648-2663, 2003	875	2003
Covalent modifications of histones during development and disease pathogenesis SR Bhaumik, E Smith, A Shilatifard Nature structural & molecular biology 14 (11), 1008-1016, 2007	871	2007
Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II R Pavri, B Zhu, G Li, P Trojer, S Mandal, A Shilatifard, D Reinberg Cell 125 (4), 703-717, 2006	853	2006
COMPASS: a complex of proteins associated with a trithorax-related SET domain protein T Miller, NJ Krogan, J Dover, H Erdjument-Bromage, P Tempst, ... Proceedings of the National Academy of Sciences 98 (23), 12902-12907, 2001	759	2001
Histone H4 lysine 16 acetylation regulates cellular lifespan W Dang, KK Steffen, R Perry, JA Dorsey, FB Johnson, A Shilatifard, ... Nature 459 (7248), 802-807, 2009	752	2009
The language of histone crosstalk JS Lee, E Smith, A Shilatifard Cell 142 (5), 682-685, 2010	714	2010
Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6 J Dover, J Schneider, MA Tawiah-Boateng, A Wood, K Dean, M Johnston, ... Journal of Biological Chemistry 277 (32), 28368-28371, 2002	698	2002
RNA Polymerase II Elongation Factors of Saccharomyces cerevisiae: a Targeted Proteomics Approach NJ Krogan, M Kim, SH Ahn, G Zhong, MS Kobor, G Cagney, A Emili, ... Molecular and cellular biology 22 (20), 6979-6992, 2002	664	2002
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia RA Grant, L Morales-Nebreda, NS Markov, S Swaminathan, M Querrey, ... Nature 590 (7847), 635-641, 2021	661	2021
Bre1, an E3 ubiquitin ligase required for recruitment and substrate selection of Rad6 at a promoter A Wood, NJ Krogan, J Dover, J Schneider, J Heidt, MA Boateng, K Dean, ... Molecular cell 11 (1), 267-274, 2003	634	2003
AFF4, a component of the ELL/P-TEFb elongation complex and a shared subunit of MLL chimeras, can link transcription elongation to leukemia C Lin, ER Smith, H Takahashi, KC Lai, S Martin-Brown, L Florens, ... Molecular cell 37 (3), 429-437, 2010	626	2010

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