| A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex MMC Lam, RR Wick, SC Watts, LT Cerdeira, KL Wyres, KE Holt Nature communications 12 (1), 4188, 2021 | 622 | 2021 |
| Trycycler: consensus long-read assemblies for bacterial genomes RR Wick, LM Judd, LT Cerdeira, J Hawkey, G Méric, B Vezina, KL Wyres, ... Genome biology 22, 1-17, 2021 | 317 | 2021 |
| Chicken Meat as a Reservoir of Colistin-Resistant Escherichia coli Strains Carrying mcr-1 Genes in South America DF Monte, MR Fernandes, L Cerdeira, F Esposito, JA Galvão, ... Antimicrobial agents and chemotherapy 61 (5), 10.1128/aac. 02718-16, 2017 | 169 | 2017 |
| The Genome of Anopheles darlingi , the main neotropical malaria vector O Marinotti, GC Cerqueira, LGP De Almeida, MIT Ferro, ELS Loreto, ... Nucleic acids research 41 (15), 7387-7400, 2013 | 142 | 2013 |
| Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains JC Ruiz, V D'Afonseca, A Silva, A Ali, AC Pinto, AR Santos, AAMC Rocha, ... PloS one 6 (4), e18551, 2011 | 122 | 2011 |
| Colistin-Resistant mcr-1-Positive Escherichia coli on Public Beaches, an Infectious Threat Emerging in Recreational Waters MR Fernandes, FP Sellera, F Esposito, CP Sabino, L Cerdeira, ... Antimicrobial agents and chemotherapy 61 (7), 10.1128/aac. 00234-17, 2017 | 101 | 2017 |
| PIPS: pathogenicity island prediction software SC Soares, VAC Abreu, RTJ Ramos, L Cerdeira, A Silva, J Baumbach, ... PloS one 7 (2), e30848, 2012 | 91 | 2012 |
| Characterization of Tn3000, a Transposon Responsible for blaNDM-1 Dissemination among Enterobacteriaceae in Brazil, Nepal, Morocco, and India JC Campos, MJF Da Silva, PRN Dos Santos, EM Barros, MO Pereira, ... Antimicrobial agents and chemotherapy 59 (12), 7387-7395, 2015 | 89 | 2015 |
| Zooanthroponotic transmission of drug-resistant Pseudomonas aeruginosa, Brazil MR Fernandes, FP Sellera, Q Moura, MPN Carvalho, PN Rosato, ... Emerging Infectious Diseases 24 (6), 1160, 2018 | 87 | 2018 |
| Genomic Features of High-Priority Salmonella enterica Serovars Circulating in the Food Production Chain, Brazil, 2000–2016 DF Monte, N Lincopan, H Berman, L Cerdeira, S Keelara, S Thakur, ... Scientific reports 9 (1), 11058, 2019 | 84 | 2019 |
| International high-risk clones of Klebsiella pneumoniae KPC-2/CC258 and Escherichia coli CTX-M-15/CC10 in urban lake waters T Nascimento, R Cantamessa, L Melo, MR Fernandes, E Fraga, M Dropa, ... Science of The Total Environment 598, 910-915, 2017 | 78 | 2017 |
| Complete Genome Sequence of Corynebacterium pseudotuberculosis I19, a Strain Isolated from a Cow in Israel with Bovine Mastitis A Silva, MPC Schneider, L Cerdeira, MS Barbosa, RTJ Ramos, ... Journal of bacteriology 193 (1), 323-324, 2011 | 73 | 2011 |
| WHO critical priority Escherichia coli as one health challenge for a post-pandemic scenario: genomic surveillance and analysis of current trends in Brazil B Fuga, FP Sellera, L Cerdeira, F Esposito, B Cardoso, H Fontana, ... Microbiology spectrum 10 (2), e01256-21, 2022 | 68 | 2022 |
| Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei J Hawkey, K Paranagama, KS Baker, RJ Bengtsson, FX Weill, ... Nature communications 12 (1), 2684, 2021 | 65 | 2021 |
| Wild owls colonized by international clones of extended-spectrum β-lactamase (CTX-M)-producing Escherichia coli and Salmonella Infantis in the Southern Cone of America D Fuentes-Castillo, M Farfan-Lopez, F Esposito, Q Moura, MR Fernandes, ... Science of the Total Environment 674, 554-562, 2019 | 65 | 2019 |
| Coexistence of CTX-M-2, CTX-M-55, CMY-2, FosA3, and QnrB19 in extraintestinal pathogenic Escherichia coli from poultry in Brazil MPV Cunha, N Lincopan, L Cerdeira, F Esposito, M Dropa, LS Franco, ... Antimicrobial Agents and Chemotherapy 61 (4), 10.1128/aac. 02474-16, 2017 | 62 | 2017 |
| Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study LT Cerdeira, AR Carneiro, RTJ Ramos, SS de Almeida, MPC Schneider, ... Journal of microbiological methods 86 (2), 218-223, 2011 | 57 | 2011 |
| Co-occurrence of clinically relevant β-lactamases and MCR-1 encoding genes in Escherichia coli from companion animals in Argentina MV Rumi, J Mas, A Elena, L Cerdeira, ME Muñoz, N Lincopan, ... Veterinary microbiology 230, 228-234, 2019 | 56 | 2019 |
| First characterization of CTX-M-15-producing Escherichia coli strains belonging to sequence type (ST) 410, ST224, and ST1284 from commercial swine in South America KC Silva, M Moreno, C Cabrera, B Spira, L Cerdeira, N Lincopan, ... Antimicrobial agents and chemotherapy 60 (4), 2505-2508, 2016 | 46 | 2016 |
| Small IncQ1 and Col-Like Plasmids Harboring blaKPC-2 and Non-Tn4401 Elements (NTEKPC-IId) in High-Risk Lineages of Klebsiella pneumoniae CG258 LT Cerdeira, MMC Lam, KL Wyres, RR Wick, LM Judd, R Lopes, ... Antimicrobial agents and chemotherapy 63 (3), 10.1128/aac. 02140-18, 2019 | 44 | 2019 |
Nilton LincopanUniversidade de São PauloVerified email at usp.br
