| Virome diversity correlates with intestinal microbiome diversity in adult monozygotic twins JL Moreno-Gallego, SP Chou, SC Di Rienzi, JK Goodrich, TD Spector, ... Cell host & microbe 25 (2), 261-272. e5, 2019 | 192 | 2019 |
| Functional characterization of cellulases identified from the cow rumen fungus Neocallimastix patriciarum W5 by transcriptomic and secretomic analyses TY Wang, HL Chen, MYJ Lu, YC Chen, HM Sung, CT Mao, HY Cho, ... Biotechnology for biofuels 4, 1-16, 2011 | 91 | 2011 |
| Prediction of histone post-translational modification patterns based on nascent transcription data Z Wang, AG Chivu, LA Choate, EJ Rice, DC Miller, T Chu, SP Chou, ... Nature genetics 54 (3), 295-305, 2022 | 90* | 2022 |
| Integrated proteomic and transcriptomic analysis of the Aedes aegyptieggshell O Marinotti, T Ngo, BB Kojin, SP Chou, B Nguyen, J Juhn, ... BMC Developmental Biology 14, 1-11, 2014 | 81 | 2014 |
| Discovering Transcriptional Regulatory Elements From Run‐On and Sequencing Data Using the Web‐Based dREG Gateway T Chu, Z Wang, SP Chou, CG Danko Current protocols in bioinformatics 66 (1), e70, 2019 | 33 | 2019 |
| Uncovering transcriptional dark matter via gene annotation independent single-cell RNA sequencing analysis MFZ Wang, M Mantri, SP Chou, GJ Scuderi, DW McKellar, JT Butcher, ... Nature Communications 12 (1), 2158, 2021 | 14 | 2021 |
| Evolution of promoter-proximal pausing enabled a new layer of transcription control AG Chivu, BA Basso, A Abuhashem, MM Leger, G Barshad, EJ Rice, ... BioRxiv, 2023.02. 19.529146, 2024 | 13 | 2024 |
| Genetic dissection of the RNA polymerase II transcription cycle SP Chou, AK Alexander, EJ Rice, LA Choate, CG Danko Elife 11, e78458, 2022 | 12 | 2022 |
| Chromatin run-on sequencing analysis finds that ECM remodeling plays an important role in canine hemangiosarcoma pathogenesis C Mukai, E Choi, KL Sams, EZ Klampen, L Anguish, BA Marks, EJ Rice, ... BMC veterinary research 16, 1-14, 2020 | 9 | 2020 |
| The Long Noncoding RNA Playrr Regulates Pitx2 Dosage and Protects Against Cardiac Arrhythmias FL Chen, EM Oxford, SP Chou, N Li, JP Leach, SK Perry, BD Sanketi, ... bioRxiv, 2022.09. 20.508562, 2022 | 1 | 2022 |
| AlleleHMM: a data-driven method to identify allele specific differences in distributed functional genomic marks SP Chou, CG Danko Nucleic Acids Research 47 (11), e64-e64, 2019 | 1 | 2019 |
| Computational Exploration of the Genetic Factors Behind Transcriptional Regulation SP Chou Cornell University, 2021 | | 2021 |
| Additional file 2 of Chromatin run-on sequencing analysis finds that ECM remodeling plays an important role in canine hemangiosarcoma pathogenesis C Mukai, E Choi, KL Sams, EZ Klampen, L Anguish, BA Marks, EJ Rice, ... (No Title), 2020 | | 2020 |
