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Daniel Spakowicz
Daniel Spakowicz
The Ohio State University Comprehensive Cancer Center
Verified email at osumc.edu - Homepage
Title
Cited by
Cited by
Year
Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
JS Johnson, DJ Spakowicz, BY Hong, LM Petersen, P Demkowicz, ...
Nature communications 10 (1), 5029, 2019
18212019
The real cost of sequencing: scaling computation to keep pace with data generation
P Muir, S Li, S Lou, D Wang, DJ Spakowicz, L Salichos, J Zhang, ...
Genome biology 17, 1-9, 2016
5242016
Longitudinal multi-omics of host–microbe dynamics in prediabetes
W Zhou, MR Sailani, K Contrepois, Y Zhou, S Ahadi, SR Leopold, ...
Nature 569 (7758), 663-671, 2019
5142019
The production of myco-diesel hydrocarbons and their derivatives by the endophytic fungus Gliocladium roseum (NRRL 50072)
GA Strobel, B Knighton, K Kluck, Y Ren, T Livinghouse, M Griffin, ...
Microbiology 154 (11), 3319-3328, 2008
3132008
Integrative personal omics profiles during periods of weight gain and loss
BD Piening, W Zhou, K Contrepois, H Röst, GJG Urban, T Mishra, ...
Cell systems 6 (2), 157-170. e8, 2018
1982018
Hypoxylon sp., an Endophyte of Persea indica, Producing 1,8-Cineole and Other Bioactive Volatiles with Fuel Potential
AR Tomsheck, GA Strobel, E Booth, B Geary, D Spakowicz, B Knighton, ...
Microbial Ecology 60, 903-914, 2010
1622010
Functional, structural, and chemical changes in myosin associated with hydrogen peroxide treatment of skeletal muscle fibers
E Prochniewicz, DA Lowe, DJ Spakowicz, LA Higgins, K O'Conor, ...
American Journal of Physiology-Cell Physiology 294 (2), C613-C626, 2008
1392008
Volatile organic compound production by organisms in the genus Ascocoryne and a re-evaluation of myco-diesel production by NRRL 50072
MA Griffin, DJ Spakowicz, TA Gianoulis, SA Strobel
Microbiology 156 (12), 3814-3829, 2010
1152010
Change in neutrophil to lymphocyte ratio during immunotherapy treatment is a non-linear predictor of patient outcomes in advanced cancers
M Li, D Spakowicz, J Burkart, S Patel, M Husain, K He, EM Bertino, ...
Journal of Cancer Research and Clinical Oncology 145, 2541-2546, 2019
1092019
Identification of a fungal 1, 8-cineole synthase from Hypoxylon sp. with specificity determinants in common with the plant synthases
JJ Shaw, T Berbasova, T Sasaki, K Jefferson-George, DJ Spakowicz, ...
Journal of Biological Chemistry 290 (13), 8511-8526, 2015
962015
Genomic Analysis of the Hydrocarbon-Producing, Cellulolytic, Endophytic Fungus Ascocoryne sarcoides
TA Gianoulis, MA Griffin, DJ Spakowicz, BF Dunican, CJ Alpha, A Sboner, ...
PLoS Genetics 8 (3), e1002558, 2012
952012
Biosynthesis and genomic analysis of medium-chain hydrocarbon production by the endophytic fungal isolate Nigrograna mackinnonii E5202H
JJ Shaw, DJ Spakowicz, RS Dalal, JH Davis, NA Lehr, BF Dunican, ...
Applied microbiology and biotechnology 99, 3715-3728, 2015
602015
An endophytic Myrothecium inundatum producing volatile organic compounds
D Banerjee, GA Strobel, B Booth, J Sears, D Spakowicz, S Busse
602010
Changes in actin structural transitions associated with oxidative inhibition of muscle contraction
E Prochniewicz, D Spakowicz, DD Thomas
Biochemistry 47 (45), 11811-11817, 2008
602008
Inferring the role of the microbiome on survival in patients treated with immune checkpoint inhibitors: causal modeling, timing, and classes of concomitant medications
D Spakowicz, R Hoyd, M Muniak, M Husain, JS Bassett, L Wang, ...
BMC cancer 20, 1-13, 2020
562020
Bone metastases, skeletal-related events, and survival in patients with metastatic non–small cell lung cancer treated with immune checkpoint inhibitors
A Qin, S Zhao, A Miah, L Wei, S Patel, A Johns, M Grogan, EM Bertino, ...
Journal of the National Comprehensive Cancer Network 19 (8), 915-921, 2021
462021
Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease
X Zhou, X Shen, JS Johnson, DJ Spakowicz, M Agnello, W Zhou, M Avina, ...
Cell Host & Microbe 32 (4), 506-526. e9, 2024
422024
Biatriospora (Ascomycota: Pleosporales) is an ecologically diverse genus including facultative marine fungi and endophytes with biotechnological potential
M Kolařík, DJ Spakowicz, R Gazis, J Shaw, A Kubátová, A Nováková, ...
Plant Systematics and Evolution 303, 35-50, 2017
412017
Biosynthesis of hydrocarbons and volatile organic compounds by fungi: bioengineering potential
DJ Spakowicz, SA Strobel
Applied microbiology and biotechnology 99, 4943-4951, 2015
332015
Checkpoint inhibitor immunotherapy toxicity and overall survival among older adults with advanced cancer
AC Johns, L Wei, M Grogan, R Hoyd, JFP Bridges, SH Patel, M Li, ...
Journal of geriatric oncology 12 (5), 813-819, 2021
292021
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