| Diffusion Pseudotime robustly reconstructs lineage branching L Haghverdi, M Büttner, FA Wolf, F Buettner, FJ Theis Nature Methods, 845–848, 2016 | 1326 | 2016 |
| Benchmarking atlas-level data integration in single-cell genomics MD Luecken, M Büttner, K Chaichoompu, A Danese, M Interlandi, ... Nature Methods, 2021 | 836 | 2021 |
| destiny: diffusion maps for large-scale single-cell data in R P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner Bioinformatics 32 (8), 1241-1243, 2016 | 601 | 2016 |
| Best practices for single-cell analysis across modalities L Heumos, AC Schaar, C Lance, A Litinetskaya, F Drost, L Zappia, ... Nature Reviews Genetics 24 (8), 550-572, 2023 | 540 | 2023 |
| Mapping single-cell data to reference atlases by transfer learning M Lotfollahi, M Naghipourfar, MD Luecken, M Khajavi, M Büttner, ... Nature biotechnology 40 (1), 121-130, 2022 | 442 | 2022 |
| A test metric for assessing single-cell RNA-seq batch correction M Büttner, Z Miao, FA Wolf, SA Teichmann, FJ Theis Nature Methods 16, 43-49, 2019 | 419 | 2019 |
| scCODA is a Bayesian model for compositional single-cell data analysis M Büttner, J Ostner, M Christian L, FJ Theis, B Schubert Nature Communications 12, 2021 | 215 | 2021 |
| Concepts and limitations for learning developmental trajectories from single cell genomics S Tritschler, M Büttner, DS Fischer, M Lange, V Bergen, H Lickert, ... Development 146 (12), dev170506, 2019 | 200 | 2019 |
| The scverse project provides a computational ecosystem for single-cell omics data analysis I Virshup, D Bredikhin, L Heumos, G Palla, G Sturm, A Gayoso, I Kats, ... Nature biotechnology 41 (5), 604-606, 2023 | 136 | 2023 |
| Distinct molecular profiles of skull bone marrow in health and neurological disorders ZI Kolabas, LB Kuemmerle, R Perneczky, B Förstera, S Ulukaya, M Ali, ... Cell 186 (17), 3706-3725. e29, 2023 | 82* | 2023 |
| Non-canonical Wnt/PCP signalling regulates intestinal stem cell lineage priming towards enteroendocrine and Paneth cell fates A Böttcher, M Büttner, S Tritschler, M Sterr, A Aliluev, L Oppenländer, ... Nature cell biology 23 (1), 23-31, 2021 | 77 | 2021 |
| Epithelial cell plasticity drives endoderm formation during gastrulation K Scheibner, S Schirge, I Burtscher, M Büttner, M Sterr, D Yang, ... Nature Cell Biology, 2021 | 65 | 2021 |
| Aldh1b1 expression defines progenitor cells in the adult pancreas and is required for Kras-induced pancreatic cancer PNAS, 2019 | 56* | 2019 |
| Transition state and ground state properties of the helix–coil transition in peptides deduced from high-pressure studies S Neumaier, M Büttner, A Bachmann, T Kiefhaber Proceedings of the National Academy of Sciences 110 (52), 20988-20993, 2013 | 47 | 2013 |
| CD81 marks immature and dedifferentiated pancreatic β-cells C Salinno, M Büttner, P Cota, S Tritschler, M Tarquis-Medina, ... Molecular Metabolism, 2021 | 42 | 2021 |
| Testing the diffusing boundary model for the helix–coil transition in peptides S Neumaier, A Reiner, M Büttner, B Fierz, T Kiefhaber Proceedings of the National Academy of Sciences 110 (32), 12905-12910, 2013 | 37 | 2013 |
| Delineating mouse β-cell identity during lifetime and in diabetes with a single cell atlas K Hrovatin, A Bastidas-Ponce, M Bakhti, L Zappia, M Büttner, C Salinno, ... Nature metabolism 5 (9), 1615-1637, 2023 | 34 | 2023 |
| Deep learning does not outperform classical machine learning for cell-type annotation ND Köhler, M Büttner, FJ Theis bioRxiv, 2019 | 31 | 2019 |
| An exhausted phenotype of TH2 cells is primed by allergen exposure, but not reinforced by allergen-specific immunotherapy SH Wang, UM Zissler, M Büttner, S Heine, A Heldner, S Kotz, L Pechtold, ... Allergy, 2021 | 27 | 2021 |
| Early life adversity shapes social subordination and cell type–specific transcriptomic patterning in the ventral hippocampus A Kos, JP Lopez, J Bordes, C De Donno, J Dine, E Brivio, S Karamihalev, ... Science advances 9 (48), eadj3793, 2023 | 17 | 2023 |
Fabian J TheisHelmholtz Munich, Technical University of MunichVerified email at helmholtz-muenchen.de