| Comparative Gene Expression Profiles Following UV Exposure in Wild-Type and SOS-Deficient Escherichia coli J Courcelle, A Khodursky, B Peter, PO Brown, PC Hanawalt Genetics 158 (1), 41-64, 2001 | 1075 | 2001 |
| Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays JA Bernstein, AB Khodursky, PH Lin, S Lin-Chao, SN Cohen Proceedings of the National Academy of Sciences 99 (15), 9697-9702, 2002 | 1027 | 2002 |
| Persisters: a distinct physiological state of E. coli D Shah, Z Zhang, AB Khodursky, N Kaldalu, K Kurg, K Lewis BMC microbiology 6, 1-9, 2006 | 785 | 2006 |
| Nitrogen regulatory protein C-controlled genes of Escherichia coli: Scavenging as a defense against nitrogen limitation DP Zimmer, E Soupene, HL Lee, VF Wendisch, AB Khodursky, BJ Peter, ... Proceedings of the National Academy of Sciences 97 (26), 14674-14679, 2000 | 490 | 2000 |
| Topoisomerase IV is a target of quinolones in Escherichia coli. AB Khodursky, EL Zechiedrich, NR Cozzarelli Proceedings of the National Academy of Sciences 92 (25), 11801-11805, 1995 | 469 | 1995 |
| Overflow Metabolism in Escherichia coli during Steady-State Growth: Transcriptional Regulation and Effect of the Redox Ratio GN Vemuri, E Altman, DP Sangurdekar, AB Khodursky, MA Eiteman Applied and environmental microbiology 72 (5), 3653-3661, 2006 | 436 | 2006 |
| Roles of topoisomerases in maintaining steady-state DNA supercoiling in Escherichia coli EL Zechiedrich, AB Khodursky, S Bachellier, R Schneider, D Chen, ... Journal of Biological Chemistry 275 (11), 8103-8113, 2000 | 410 | 2000 |
| Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli BJ Peter, J Arsuaga, AM Breier, AB Khodursky, PO Brown, NR Cozzarelli Genome biology 5, 1-16, 2004 | 370 | 2004 |
| Adaptation to famine: a family of stationary-phase genes revealed by microarray analysis TH Tani, A Khodursky, RM Blumenthal, PO Brown, RG Matthews Proceedings of the National Academy of Sciences 99 (21), 13471-13476, 2002 | 311 | 2002 |
| DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli AB Khodursky, BJ Peter, NR Cozzarelli, D Botstein, PO Brown, ... Proceedings of the National Academy of Sciences 97 (22), 12170-12175, 2000 | 300 | 2000 |
| Topoisomerase IV, not gyrase, decatenates products of site-specific recombination inEscherichia coli EL Zechiedrich, AB Khodursky, NR Cozzarelli Genes & development 11 (19), 2580-2592, 1997 | 289 | 1997 |
| Analysis of topoisomerase function in bacterial replication fork movement: use of DNA microarrays AB Khodursky, BJ Peter, MB Schmid, J DeRisi, D Botstein, PO Brown, ... Proceedings of the National Academy of Sciences 97 (17), 9419-9424, 2000 | 266 | 2000 |
| The mechanism of inhibition of topoisomerase IV by quinolone antibacterials AB Khodursky, NR Cozzarelli Journal of Biological Chemistry 273 (42), 27668-27677, 1998 | 212 | 1998 |
| Spatial patterns of transcriptional activity in the chromosome of Escherichia coli KS Jeong, J Ahn, AB Khodursky Genome biology 5, 1-10, 2004 | 198 | 2004 |
| A note on using permutation-based false discovery rate estimates to compare different analysis methods for microarray data Y Xie, W Pan, AB Khodursky Bioinformatics 21 (23), 4280-4288, 2005 | 170 | 2005 |
| RNA profiles reveal signatures of future health and disease in pregnancy M Rasmussen, M Reddy, R Nolan, J Camunas-Soler, A Khodursky, ... Nature 601 (7893), 422-427, 2022 | 142 | 2022 |
| Evolutionary genomics of ecological specialization S Zhong, A Khodursky, DE Dykhuizen, AM Dean Proceedings of the National Academy of Sciences 101 (32), 11719-11724, 2004 | 113 | 2004 |
| Isolation of Escherichia coli mRNA and comparison of expression using mRNA and total RNA on DNA microarrays VF Wendisch, DP Zimmer, A Khodursky, B Peter, N Cozzarelli, S Kustu Analytical biochemistry 290 (2), 205-213, 2001 | 108 | 2001 |
| Gene expression patterns of sulfur starvation in Synechocystis sp. PCC 6803 Z Zhang, ND Pendse, KN Phillips, JB Cotner, A Khodursky BMC genomics 9, 1-14, 2008 | 94 | 2008 |
| A classification based framework for quantitative description of large-scale microarray data DP Sangurdekar, F Srienc, AB Khodursky Genome biology 7, 1-17, 2006 | 92 | 2006 |
