| Comparison of normalization and differential expression analyses using RNA-Seq data from 726 individual Drosophila melanogaster Y Lin, K Golovnina, ZX Chen, HN Lee, YLS Negron, H Sultana, B Oliver, ... BMC genomics 17, 1-20, 2016 | 199 | 2016 |
| Comparative validation of the D. melanogaster modENCODE transcriptome annotation ZX Chen, D Sturgill, J Qu, H Jiang, S Park, N Boley, AM Suzuki, ... Genome research 24 (7), 1209-1223, 2014 | 186 | 2014 |
| Sex-and tissue-specific functions of Drosophila doublesex transcription factor target genes E Clough, E Jimenez, YA Kim, C Whitworth, MC Neville, LU Hempel, ... Developmental cell 31 (6), 761-773, 2014 | 145 | 2014 |
| Microenvironmental Gene Expression Plasticity Among Individual Drosophila melanogaster Y Lin, ZX Chen, B Oliver, ST Harbison G3: Genes, Genomes, Genetics 6 (12), 4197-4210, 2016 | 38 | 2016 |
| SAGD: a comprehensive sex-associated gene database from transcriptomes MW Shi, NA Zhang, CP Shi, CJ Liu, ZH Luo, DY Wang, AY Guo, ZX Chen Nucleic acids research 47 (D1), D835-D840, 2019 | 30 | 2019 |
| X Chromosome and Autosome Dosage Responses in Drosophila melanogaster Heads ZX Chen, B Oliver G3: Genes, Genomes, Genetics 5 (6), 1057-1063, 2015 | 24 | 2015 |
| Male‐Biased Gut Microbiome and Metabolites Aggravate Colorectal Cancer Development L Wang, YX Tu, L Chen, Y Zhang, XL Pan, SQ Yang, SJ Zhang, SH Li, ... Advanced Science 10 (25), 2206238, 2023 | 23 | 2023 |
| TDG is a pig-specific epigenetic regulator with insensitivity to H3K9 and H3K27 demethylation in nuclear transfer embryos X Liu, L Chen, T Wang, J Zhou, Z Li, G Bu, J Zhang, S Yin, D Wu, C Dou, ... Stem cell reports 16 (11), 2674-2689, 2021 | 22 | 2021 |
| The epigenetic landscapes of histone modifications on HSV-1 genome in human THP-1 cells C Gao, L Chen, SB Tang, QY Long, JL He, NA Zhang, HB Shu, ZX Chen, ... Antiviral Research 176, 104730, 2020 | 22 | 2020 |
| Evolution and function of developmentally dynamic pseudogenes in mammals SH Qian, L Chen, YL Xiong, ZX Chen Genome Biology 23 (1), 235, 2022 | 20 | 2022 |
| GenOrigin: A comprehensive protein-coding gene origination database on the evolutionary timescale of life YB Tong, MW Shi, SH Qian, YJ Chen, ZH Luo, YX Tu, YL Xiong, YJ Geng, ... Journal of Genetics and Genomics 48 (12), 1122-1129, 2021 | 20 | 2021 |
| Anti-masculinization induced by aromatase inhibitors in adult female zebrafish L Chen, L Wang, Q Cheng, YX Tu, Z Yang, RZ Li, ZH Luo, ZX Chen BMC genomics 21, 1-10, 2020 | 15 | 2020 |
| Species-specific KRAB-ZFPs function as repressors of retroviruses by targeting PBS regions B Yang, L Fang, Q Gao, C Xu, J Xu, ZX Chen, Y Wang, P Yang Proceedings of the National Academy of Sciences 119 (11), e2119415119, 2022 | 14 | 2022 |
| pyMeSHSim: an integrative python package for biomedical named entity recognition, normalization, and comparison of MeSH terms ZH Luo, MW Shi, Z Yang, HY Zhang, ZX Chen BMC bioinformatics 21, 1-14, 2020 | 14 | 2020 |
| In vivo dynamics and regulation of DNA G-quadruplex structures in mammals ZH Zhang, SH Qian, D Wei, ZX Chen Cell & Bioscience 13 (1), 117, 2023 | 13 | 2023 |
| Gut microbiome in tumorigenesis and therapy of colorectal cancer L Wang, KC Yu, Y Hou, M Guo, F Yao, ZX Chen Journal of Cellular Physiology 238 (1), 94-108, 2023 | 13 | 2023 |
| A landscape of differentiated biological processes involved in the initiation of sex differentiation in zebrafish D Ye, YX Tu, H Wang, M He, Y Wang, Z Chen, ZX Chen, Y Sun Water Biology and Security 1 (3), 100059, 2022 | 11 | 2022 |
| Dynamic Chromatin States Coupling with Key Transcription Factors in Colitis‐Associated Colorectal Cancer L Chen, Z Luo, C Zhao, Q Li, Y Geng, Y Xiao, MK Chen, L Li, ZX Chen, ... Advanced Science 9 (23), 2200536, 2022 | 10 | 2022 |
| EndoQuad: a comprehensive genome-wide experimentally validated endogenous G-quadruplex database SH Qian, MW Shi, YL Xiong, Y Zhang, ZH Zhang, XM Song, XY Deng, ... Nucleic Acids Research 52 (D1), D72-D80, 2024 | 9 | 2024 |
| G-quadruplexes in genomes of viruses infecting eukaryotes or prokaryotes are under different selection pressures from hosts Z Li, SH Qian, F Wang, HI Mohamed, G Yang, ZX Chen, D Wei Journal of Genetics and Genomics 49 (1), 20-29, 2022 | 9 | 2022 |
Brian OliverIndiana UniversityVerified email at iu.edu