| RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction JA Cruz, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, S Cao, R Das, ... Rna 18 (4), 610-625, 2012 | 309 | 2012 |
| The Database of Macromolecular Motions: new features added at the decade mark S Flores, N Echols, D Milburn, B Hespenheide, K Keating, J Lu, S Wells, ... Nucleic acids research 34 (suppl_1), D296-D301, 2006 | 182 | 2006 |
| Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions R Moretti, SJ Fleishman, R Agius, M Torchala, PA Bates, PL Kastritis, ... Proteins: Structure, Function, and Bioinformatics 81 (11), 1980-1987, 2013 | 114 | 2013 |
| Phosphorylation by PINK1 releases the UBL domain and initializes the conformational opening of the E3 ubiquitin ligase Parkin TR Caulfield, FC Fiesel, EL Moussaud-Lamodière, DFAR Dourado, ... PLoS computational biology 10 (11), e1003935, 2014 | 109 | 2014 |
| Turning limited experimental information into 3D models of RNA SC Flores, RB Altman Rna 16 (9), 1769-1778, 2010 | 100 | 2010 |
| Structural and functional impact of parkinson disease‐associated mutations in the E3 ubiquitin ligase parkin FC Fiesel, TR Caulfield, EL Moussaud‐Lamodière, K Ogaki, ... Human mutation 36 (8), 774-786, 2015 | 87 | 2015 |
| Predicting RNA structure by multiple template homology modeling SC Flores, Y Wan, R Russell, RB Altman Biocomputing 2010, 216-227, 2010 | 86 | 2010 |
| Fast flexible modeling of RNA structure using internal coordinates SC Flores, M Sherman, CM Bruns, P Eastman, RB Altman IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (5 …, 2010 | 73 | 2010 |
| A multiscale approach to predicting affinity changes in protein–protein interfaces DFAR Dourado, SC Flores Proteins: Structure, Function, and Bioinformatics 82 (10), 2681-2690, 2014 | 67 | 2014 |
| Connecting the sequence-space of bacterial signaling proteins to phenotypes using coevolutionary landscapes RR Cheng, O Nordesjö, RL Hayes, H Levine, SC Flores, JN Onuchic, ... Molecular biology and evolution 33 (12), 3054-3064, 2016 | 65 | 2016 |
| StoneHinge: Hinge prediction by network analysis of individual protein structures KS Keating, SC Flores, MB Gerstein, LA Kuhn Protein Science 18 (2), 359-371, 2009 | 65 | 2009 |
| Strategies for articulated multibody-based adaptive coarse grain simulation of RNA M Poursina, KD Bhalerao, SC Flores, KS Anderson, A Laederach Methods in enzymology 487, 73-98, 2011 | 62 | 2011 |
| Hinge Atlas: relating protein sequence to sites of structural flexibility SC Flores, LJ Lu, J Yang, N Carriero, MB Gerstein BMC bioinformatics 8, 1-20, 2007 | 60 | 2007 |
| FlexOracle: predicting flexible hinges by identification of stable domains SC Flores, MB Gerstein BMC bioinformatics 8, 1-17, 2007 | 53 | 2007 |
| HingeMaster: normal mode hinge prediction approach and integration of complementary predictors SC Flores, KS Keating, J Painter, F Morcos, K Nguyen, EA Merritt, ... Proteins: Structure, Function, and Bioinformatics 73 (2), 299-319, 2008 | 50 | 2008 |
| Model study of coherent-control of the femtosecond primary event of vision SC Flores, VS Batista The Journal of Physical Chemistry B 108 (21), 6745-6749, 2004 | 45 | 2004 |
| Multiscale modeling of macromolecular biosystems SC Flores, J Bernauer, S Shin, R Zhou, X Huang Briefings in bioinformatics 13 (4), 395-405, 2012 | 40 | 2012 |
| Dissecting the Mechanism of Epac Activation via Hydrogen− Deuterium Exchange FT-IR and Structural Modeling S Yu, F Fan, SC Flores, F Mei, X Cheng Biochemistry 45 (51), 15318-15326, 2006 | 38 | 2006 |
| A conserved histidine in switch-II of EF-G moderates release of inorganic phosphate RK Koripella, M Holm, D Dourado, CS Mandava, S Flores, S Sanyal Scientific reports 5 (1), 12970, 2015 | 34 | 2015 |
| Fast fitting to low resolution density maps: elucidating large-scale motions of the ribosome SC Flores Nucleic Acids Research, 2013 | 22 | 2013 |
Mark GersteinProfessor of Biomedical Informatics, Yale UniversityVerified email at yale.edu