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Jonathan Shortt
Jonathan Shortt
University of Colorado Anschutz Medical Campus
Verified email at ucdenver.edu
Title
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Cited by
Year
Mapping the human genetic architecture of COVID-19
Writing group Writing group leaders Pathak Gita A. 6 Andrews Shea J. 7 Kanai ...
Nature 600 (7889), 472-477, 2021
8382021
Whole-genome sequencing reveals host factors underlying critical COVID-19
A Kousathanas, E Pairo-Castineira, K Rawlik, A Stuckey, CA Odhams, ...
Nature 607 (7917), 97-103, 2022
3052022
Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
W Zhou, M Kanai, KHH Wu, H Rasheed, K Tsuo, JB Hirbo, Y Wang, ...
Cell Genomics 2 (10), 2022
2822022
Squamate reptiles challenge paradigms of genomic repeat element evolution set by birds and mammals
GIM Pasquesi, RH Adams, DC Card, DR Schield, AB Corbin, BW Perry, ...
Nature Communications 9 (1), 2774, 2018
1252018
Global Biobank analyses provide lessons for developing polygenic risk scores across diverse cohorts
Y Wang, S Namba, E Lopera, S Kerminen, K Tsuo, K Läll, M Kanai, ...
Cell Genomics 3 (1), 2023
812023
Meta-analysis fine-mapping is often miscalibrated at single-variant resolution
M Kanai, R Elzur, W Zhou, KHH Wu, H Rasheed, K Tsuo, JB Hirbo, ...
Cell genomics 2 (12), 2022
652022
A second update on mapping the human genetic architecture of COVID-19
M Kanai, SJ Andrews, M Cordioli, C Stevens, BM Neale, M Daly, A Ganna, ...
Nature 621 (7977), E7-E26, 2023
502023
SARS-CoV-2 susceptibility and COVID-19 disease severity are associated with genetic variants affecting gene expression in a variety of tissues
M D’Antonio, JP Nguyen, TD Arthur, H Matsui, BM Neale, M Daly, ...
Cell reports 37 (7), 2021
392021
Conservation, extensive heterozygosity, and convergence of signaling potential all indicate a critical role for KIR3DL3 in higher primates
LA Leaton, J Shortt, KM Kichula, S Tao, N Nemat-Gorgani, AJ Mentzer, ...
Frontiers in Immunology 10, 24, 2019
272019
Finding and extending ancient simple sequence repeat-derived regions in the human genome
JA Shortt, RP Ruggiero, C Cox, AC Wacholder, DD Pollock
Mobile DNA 11, 1-12, 2020
262020
Building a vertically integrated genomic learning health system: The biobank at the Colorado Center for Personalized Medicine
LK Wiley, JA Shortt, ER Roberts, J Lowery, E Kudron, M Lin, D Mayer, ...
The American Journal of Human Genetics 111 (1), 11-23, 2024
242024
Adaptive admixture of HLA class I allotypes enhanced genetically determined strength of natural killer cells in East Asians
Z Deng, J Zhen, GF Harrison, G Zhang, R Chen, G Sun, Q Yu, ...
Molecular biology and evolution 38 (6), 2582-2596, 2021
202021
Whole genome amplification and reduced-representation genome sequencing of Schistosoma japonicum miracidia
JA Shortt, DC Card, DR Schield, Y Liu, B Zhong, TA Castoe, EJ Carlton, ...
PLoS neglected tropical diseases 11 (1), e0005292, 2017
202017
Population genomic analyses of schistosome parasites highlight critical challenges facing endgame elimination efforts
JA Shortt, LE Timm, NR Hales, ZL Nikolakis, DR Schield, BW Perry, Y Liu, ...
Scientific Reports 11 (1), 6884, 2021
162021
Platform technology to generate broadly cross‐reactive antibodies to α‐helical epitopes in hemagglutinin proteins from influenza A viruses
Z Jiang, L Gera, CT Mant, B Hirsch, Z Yan, JA Shortt, DD Pollock, Z Qian, ...
Peptide Science 106 (2), 144-159, 2016
122016
Allele imputation for the killer cell immunoglobulin-like receptor KIR3DL1/S1
GF Harrison, LA Leaton, EA Harrison, KM Kichula, MK Viken, J Shortt, ...
PLoS Computational Biology 18 (2), e1009059, 2022
112022
SNAPPY: Single Nucleotide Assignment of Phylogenetic Parameters on the Y chromosome
AL Severson, JA Shortt, FL Mendez, GL Wojcik, CD Bustamante, ...
bioRxiv, 454736, 2018
112018
Soluble CD14 levels in the jackson heart study: Associations with cardiovascular disease risk and genetic variants
MA Stanislawski, LA Lange, LM Raffield, NA Zakai, M Meyer, K Ferrier, ...
Arteriosclerosis, thrombosis, and vascular biology 41 (6), e369-e378, 2021
102021
Mechanistic models of protein evolution
DD Pollock, ST Pollard, JA Shortt, RA Goldstein
Evolutionary Biology: Self/Nonself Evolution, Species and Complex Traits …, 2017
92017
Admix-kit: an integrated toolkit and pipeline for genetic analyses of admixed populations
K Hou, S Gogarten, J Kim, X Hua, JA Dias, Q Sun, Y Wang, T Tan, ...
Bioinformatics 40 (4), btae148, 2024
82024
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