| Sisa: Set-centric instruction set architecture for graph mining on processing-in-memory systems M Besta, R Kanakagiri, G Kwasniewski, R Ausavarungnirun, J Beránek, ... MICRO-54: 54th Annual IEEE/ACM International Symposium on Microarchitecture …, 2021 | 107 | 2021 |
| Streaming message interface: High-performance distributed memory programming on reconfigurable hardware T De Matteis, J de Fine Licht, J Beránek, T Hoefler Proceedings of the International Conference for High Performance Computing …, 2019 | 43 | 2019 |
| A RISC-V in-network accelerator for flexible high-performance low-power packet processing S Di Girolamo, A Kurth, A Calotoiu, T Benz, T Schneider, J Beranek, ... 2021 ACM/IEEE 48th Annual International Symposium on Computer Architecture …, 2021 | 41* | 2021 |
| Graphminesuite: Enabling high-performance and programmable graph mining algorithms with set algebra M Besta, Z Vonarburg-Shmaria, Y Schaffner, L Schwarz, G Kwasniewski, ... arXiv preprint arXiv:2103.03653, 2021 | 37 | 2021 |
| Network-accelerated non-contiguous memory transfers S Di Girolamo, K Taranov, A Kurth, M Schaffner, T Schneider, J Beránek, ... Proceedings of the International Conference for High Performance Computing …, 2019 | 34 | 2019 |
| Runtime vs scheduler: analyzing dask’s overheads S Böhm, J Beránek 2020 IEEE/ACM Workflows in Support of Large-Scale Science (WORKS), 1-8, 2020 | 15 | 2020 |
| PsPIN: A high-performance low-power architecture for flexible in-network compute S Di Girolamo, A Kurth, A Calotoiu, T Benz, T Schneider, J Beránek, ... arXiv preprint arXiv:2010.03536, 2020 | 8 | 2020 |
| Tunable and portable extreme-scale drug discovery platform at exascale: the lIGATE approach G Palermo, G Accordi, D Gadioli, E Vitali, C Silvano, B Guindani, ... Proceedings of the 20th ACM International Conference on Computing Frontiers …, 2023 | 5 | 2023 |
| Alternative paths reordering using probabilistic time-dependent routing M Golasowski, J Beránek, M Šurkovský, L Rapant, D Szturcová, ... Advances in Networked-based Information Systems: The 22nd International …, 2020 | 5 | 2020 |
| A System Development Kit for Big Data Applications on FPGA-based Clusters: The EVEREST Approach C Pilato, S Banik, J Beránek, F Brocheton, J Castrillon, R Cevasco, ... 2024 Design, Automation & Test in Europe Conference & Exhibition (DATE), 1-6, 2024 | 3 | 2024 |
| ESTEE: A simulation toolkit for distributed workflow execution J Beránek, S Böhm, V Cima The International Conference for High Performance Computing, Networking …, 2019 | 3 | 2019 |
| HyperQueue: Efficient and ergonomic task graphs on HPC clusters J Beránek, A Böhm, G Palermo, J Martinovič, B Jansík SoftwareX 27, 101814, 2024 | 1 | 2024 |
| pyCaverDock: Python implementation of the popular tool for analysis of ligand transport with advanced caching and batch calculation support O Vavra, J Beranek, J Stourac, M Surkovsky, J Filipovic, J Damborsky, ... Bioinformatics 39 (8), btad443, 2023 | 1 | 2023 |
| Analysis of workflow schedulers in simulated distributed environments J Beránek, S Böhm, V Cima The Journal of Supercomputing 78 (13), 15154-15180, 2022 | 1 | 2022 |
| General in-network processing–time is ripe! T Hoefler, S Di Girolamo, K Taranov, D De Sensi, L Benini, RE Grant, ... HPC China 2020, 2020 | 1 | 2020 |
| A distributed environment for traffic navigation systems J Martinovič, M Golasowski, K Slaninová, J Beránek, M Šurkovský, ... Complex, Intelligent, and Software Intensive Systems: Proceedings of the …, 2020 | 1 | 2020 |
| LIGATE-LIgand Generator and portable drug discovery platform AT Exascale G Palermo, G Accordi, D Gadioli, Y Zhang, E Vitali, B Guindani, ... Proceedings of the 21st ACM International Conference on Computing Frontiers …, 2024 | | 2024 |
| Ergonomie a efektivita workflow na HPC klastrech J Beránek Vysoká škola báňská–Technická univerzita Ostrava, 2024 | | 2024 |
| HyperQueue: Overcoming Limitations of HPC Job Managers S Böhm, J Beránek, V Cima, R Macháček, V Jha, A Kočí, B Jansík, ... | | 2021 |
| Haydi: Rapid Prototyping and Combinatorial Objects S Böhm, J Beránek, M Šurkovský International Symposium on Foundations of Information and Knowledge Systems …, 2018 | | 2018 |