Srikanth S. Manda

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Akhilesh Pandey, M.D., Ph.D.Professor, Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MinnesotaVerified email at mayo.edu
Harsha Gowda, Ph.D.MedGenome Inc.Verified email at medgenome.com
Dr. T. S. Keshava PrasadYenepoya (Deemed to be University), MangaloreVerified email at yenepoya.edu.in
Raja Sekhar NirujogiMRC- Protein Phosphorylation and Ubiquitylation Unit, University of Dundee, Dundee, UKVerified email at dundee.ac.uk
Yashwanth SubbannayyaSchool of Biosciences and Medicine, University of SurreyVerified email at surrey.ac.uk
Sneha M. PintoSchool of Biosciences and Medicine, University of SurreyVerified email at surrey.ac.uk
Nandini SahasrabuddheInstitute of BioinformaticsVerified email at ibioinformatics.org
Santosh Renuse, Ph.D.Associate Director, AstraZeneca, Gaithersburg, MDVerified email at astrazeneca.com
Min-Sik Kim, Ph.D.Department of New Biology, DGISTVerified email at dgist.ac.kr
Dhanashree Kelkar SIndian institute of science education and researchVerified email at iiserpune.ac.in
Sartaj Ahmad MirNational University of SingaporeVerified email at nus.edu.sg
Renu GoelNorthwestern University, Chicago, IL, USAVerified email at northwestern.edu
Sandip ChavanMayo ClinicVerified email at mayo.edu
Gajanan satheJohns Hopkins UniversityVerified email at ibioinformatics.org
JUAN CARLOS ROAPONTIFICIA UNIVERSIDAD CATOLICA DE CHILE. Professor and Chair Department of Pathology.Verified email at med.puc.cl
Harsh Pawar, Ph.D.Visiting ResearcherVerified email at lancaster.ac.uk
Mustafa A. BarbhuiyaMedical Director of Clinical Chemistry and Point of Care Testing, Department of PathologyVerified email at baystatehealth.org
Jyoti SharmaInstitute of BioinformaticsVerified email at ibioinformatics.org
Praveen KumarData Sciences & Quantitative Biology, Discovery Sciences, AstraZenecaVerified email at astrazeneca.com
William HancockProfessor Chemistry, Northeastern UniversityVerified email at neu.edu

Srikanth S. Manda

Data Scientist, Computational Science, Cancer Data Science, CMRI

Verified email at cmri.org.au

Genomics Proteogenomics Computational Biology Data science Cancer biomarkers


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A draft map of the human proteome MS Kim, SM Pinto, D Getnet, RS Nirujogi, SS Manda, R Chaerkady, ... Nature 509 (7502), 575-581, 2014	2564	2014
Plasma Proteome Database as a resource for proteomics research: 2014 update V Nanjappa, JK Thomas, A Marimuthu, B Muthusamy, A Radhakrishnan, ... Nucleic acids research 42 (D1), D959-D965, 2014	383	2014
Tissue matrix arrays for high-throughput screening and systems analysis of cell function VZ Beachley, MT Wolf, K Sadtler, SS Manda, H Jacobs, MR Blatchley, ... Nature methods 12 (12), 1197-1204, 2015	185	2015
Proteomic analysis of human follicular fluid: A new perspective towards understanding folliculogenesis SM Aditi S. Ambekar, Raja Sekhar Nirujogi, Srinivas M Journal of Proteomics, 2013	176	2013
Proteomic analysis of human vitreous humor KR Murthy, R Goel, Y Subbannayya, HKC Jacob, PR Murthy, SS Manda, ... Clinical proteomics 11, 1-11, 2014	157	2014
Proteomic analysis of human osteoarthritis synovial fluid L Balakrishnan, RS Nirujogi, S Ahmad, M Bhattacharjee, SS Manda, ... Clinical proteomics 11, 1-13, 2014	155	2014
Widespread somatic L1 retrotransposition occurs early during gastrointestinal cancer evolution AD Ewing, A Gacita, LD Wood, F Ma, D Xing, MS Kim, SS Manda, G Abril, ... Genome research 25 (10), 1536-1545, 2015	152	2015
Pan-cancer proteomic map of 949 human cell lines E Gonçalves, RC Poulos, Z Cai, S Barthorpe, SS Manda, N Lucas, A Beck, ... Cancer Cell 40 (8), 835-849. e8, 2022	129	2022
Differential proteomic analysis of synovial fluid from rheumatoid arthritis and osteoarthritis patients L Balakrishnan, M Bhattacharjee, S Ahmad, RS Nirujogi, S Renuse, ... Clinical proteomics 11, 1-14, 2014	128	2014
Strategies to enable large-scale proteomics for reproducible research RC Poulos, PG Hains, R Shah, N Lucas, D Xavier, SS Manda, A Anees, ... Nature communications 11 (1), 3793, 2020	115	2020
SILAC‐based quantitative proteomic analysis of gastric cancer secretome A Marimuthu, Y Subbannayya, NA Sahasrabuddhe, L Balakrishnan, ... PROTEOMICS–Clinical Applications 7 (5-6), 355-366, 2013	84	2013
Quantitative phosphoproteomic analysis of IL‐33‐mediated signaling SM Pinto, RS Nirujogi, PL Rojas, AH Patil, SS Manda, Y Subbannayya, ... Proteomics 15 (2-3), 532-544, 2015	73	2015
Identification of differentially expressed serum proteins in gastric adenocarcinoma Y Subbannayya, SA Mir, S Renuse, SS Manda, SM Pinto, ... Journal of proteomics 127, 80-88, 2015	70	2015
Calcium calmodulin dependent kinase kinase 2-a novel therapeutic target for gastric adenocarcinoma Y Subbannayya, N Syed, MA Barbhuiya, R Raja, A Marimuthu, ... Cancer biology & therapy 16 (2), 336-345, 2015	69	2015
Identification of head and neck squamous cell carcinoma biomarker candidates through proteomic analysis of cancer cell secretome A Marimuthu, S Chavan, G Sathe, NA Sahasrabuddhe, SM Srikanth, ... Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1834 (11), 2308-2316, 2013	67	2013
Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes TSK Prasad, AK Mohanty, M Kumar, SK Sreenivasamurthy, G Dey, ... Genome research 27 (1), 133-144, 2017	66	2017
Annotation of the zebrafish genome through an integrated transcriptomic and proteomic analysis DS Kelkar, E Provost, R Chaerkady, B Muthusamy, SS Manda, ... Molecular & cellular proteomics 13 (11), 3184-3198, 2014	65	2014
Phosphoproteomic profiling reveals Epstein-Barr virus protein kinase integration of DNA damage response and mitotic signaling R Li, G Liao, RS Nirujogi, SM Pinto, PG Shaw, TC Huang, J Wan, J Qian, ... PLoS pathogens 11 (12), e1005346, 2015	62	2015
Proteomics of human aqueous humor KR Murthy, P Rajagopalan, SM Pinto, J Advani, PR Murthy, R Goel, ... Omics: a journal of integrative biology 19 (5), 283-293, 2015	58	2015
A multi-omic analysis of human naïve CD4+ T cells CJ Mitchell, D Getnet, MS Kim, SS Manda, P Kumar, TC Huang, SM Pinto, ... BMC systems biology 9, 1-16, 2015	54	2015

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