Bora Uyar

Cited by

	All	Since 2020
Citations	3579	1843
h-index	21	21
i10-index	24	22

420

210

105

315

2012201320142015201620172018201920202021202220232024202585 142 161 242 231 259 288 298 335 325 369 353 418 43

Public access

View all

24 articles

0 articles

available

not available

Based on funding mandates

Co-authors

Altuna AkalinMax Delbrück Center for Molecular MedicineVerified email at mdc-berlin.de
Toby GibsonEMBLVerified email at embl.de
Norman E. DaveyInstitute Of Cancer Research, LondonVerified email at icr.ac.uk
Robert J. WeatherittEMBL Australia and Garvan Institute of Medical ResearchVerified email at emblaustralia.org
Vedran FrankeMax Delbrueck CenterVerified email at mdc-berlin.de
Aidan BuddTrainer, EMBO Solutions GmbHVerified email at earlham.ac.uk
Baris TursunUniversity of HamburgVerified email at uni-hamburg.de
Jonathan RonenMax Delbruck Center for Molecular Medicine, BerlinVerified email at mdc-berlin.de
Sebastian DieckeStem cell Core Director Max Delbrück Center BerlinVerified email at mdc-berlin.de
Manjeet KumarBioinformatics Scientist | EMBL HeidelbergVerified email at iitb.ac.in
Nansheng ChenSimon Fraser UniversityVerified email at sfu.ca
Katrina MeyerPostdoc, Max Planck Institute for Molecular GeneticsVerified email at molgen.mpg.de
Katarzyna WreczyckaMax Delbrück Center for Molecular Medicine in the Helmholtz AssociationVerified email at mdc-berlin.de
Nikolaus RajewskyProfessor, Systems Biology, Max Delbruck Center for Molecular Medicine, BerlinVerified email at mdc-berlin.de
Matthias SelbachProfessor, Max Delbruck Center for Molecular MedicineVerified email at mdc-berlin.de
Bálint MészárosSt. Jude Children's Research HospitalVerified email at stjude.org
Dosztanyi ZsuzsannaEötvös Loránd UniversityVerified email at ttk.elte.hu
Anna SzymborskaScientist, Max Delbrück Center for Molecular MedicineVerified email at mdc-berlin.de
Holger GerhardtProfessor, Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), BerlinVerified email at mdc-berlin.de
Andreas ZanzoniAix Marseille UniversityVerified email at univ-amu.fr

Bora Uyar

Max Delbrueck Center for Molecular Medicine - The Berlin Institute for Medical Systems Biology

Verified email at mdc-berlin.de

Bioinformatics Omics Computational Biology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Attributes of short linear motifs NE Davey, K Van Roey, RJ Weatheritt, G Toedt, B Uyar, B Altenberg, ... Molecular BioSystems 8 (1), 268-281, 2012	665	2012
Short linear motifs: ubiquitous and functionally diverse protein interaction modules directing cell regulation K Van Roey, B Uyar, RJ Weatheritt, H Dinkel, M Seiler, A Budd, TJ Gibson, ... Chemical reviews 114 (13), 6733-6778, 2014	496	2014
ELM—the database of eukaryotic linear motifs H Dinkel, S Michael, RJ Weatheritt, NE Davey, K Van Roey, B Altenberg, ... Nucleic acids research 40 (D1), D242-D251, 2012	379	2012
The eukaryotic linear motif resource ELM: 10 years and counting H Dinkel, K Van Roey, S Michael, NE Davey, RJ Weatheritt, D Born, ... Nucleic acids research 42 (D1), D259-D266, 2014	369	2014
ELM 2016—data update and new functionality of the eukaryotic linear motif resource H Dinkel, K Van Roey, S Michael, M Kumar, B Uyar, B Altenberg, ... Nucleic acids research 44 (D1), D294-D300, 2016	341	2016
Degrons in cancer B Mészáros, M Kumar, TJ Gibson, B Uyar, Z Dosztányi Science signaling 10 (470), eaak9982, 2017	145	2017
Single-cell analyses of aging, inflammation and senescence B Uyar, D Palmer, A Kowald, HM Escobar, I Barrantes, S Möller, A Akalin, ... Ageing research reviews 64, 101156, 2020	141	2020
Mutations in disordered regions can cause disease by creating dileucine motifs K Meyer, M Kirchner, B Uyar, JY Cheng, G Russo, ... Cell 175 (1), 239-253. e17, 2018	138	2018
genBlastG: using BLAST searches to build homologous gene models R She, JSC Chu, B Uyar, J Wang, K Wang, N Chen Bioinformatics 27 (15), 2141-2143, 2011	118	2011
How pathogens use linear motifs to perturb host cell networks A Via, B Uyar, C Brun, A Zanzoni Trends in biochemical sciences 40 (1), 36-48, 2015	115	2015
Proteome-wide analysis of human disease mutations in short linear motifs: neglected players in cancer? B Uyar, RJ Weatheritt, H Dinkel, NE Davey, TJ Gibson Molecular BioSystems 10 (10), 2626-2642, 2014	108	2014
FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells E Kolundzic, A Ofenbauer, SI Bulut, B Uyar, G Baytek, A Sommermeier, ... Developmental Cell 46 (5), 611-626. e12, 2018	91	2018
PiGx: reproducible genomics analysis pipelines with GNU Guix R Wurmus, B Uyar, B Osberg, V Franke, A Gosdschan, K Wreczycka, ... Gigascience 7 (12), giy123, 2018	73	2018
HOT or not: examining the basis of high-occupancy target regions K Wreczycka, V Franke, B Uyar, R Wurmus, S Bulut, B Tursun, A Akalin Nucleic acids research 47 (11), 5735-5745, 2019	65	2019
Transcriptional repression of NFKBIA triggers constitutive IKK‐ and proteasome‐independent p65/RelA activation in senescence M Kolesnichenko, N Mikuda, UE Höpken, E Kärgel, B Uyar, AB Tufan, ... The EMBO journal 40 (6), e104296, 2021	54	2021
Identifying tumor cells at the single-cell level using machine learning J Dohmen, A Baranovskii, J Ronen, B Uyar, V Franke, A Akalin Genome Biology 23 (1), 123, 2022	51	2022
Computational genomics with R A Akalin Chapman and Hall/CRC, 2020	39	2020
The IκB kinase complex is a regulator of mRNA stability N Mikuda, M Kolesnichenko, P Beaudette, O Popp, B Uyar, W Sun, ... The EMBO journal 37 (24), e98658, 2018	34	2018
RNA-seq analysis of the C. briggsae transcriptome B Uyar, JSC Chu, IA Vergara, SY Chua, MR Jones, T Wong, DL Baillie, ... Genome research 22 (8), 1567-1580, 2012	34	2012
RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B Uyar, D Yusuf, R Wurmus, N Rajewsky, U Ohler, A Akalin Nucleic acids research 45 (10), e91-e91, 2017	30	2017

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors