Articles with public access mandates - Sarah A. TeichmannLearn more
Not available anywhere: 13
Review
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ...
Nature biotechnology 33 (2), 155-160, 2015
Mandates: European Commission
Review
A test metric for assessing single-cell RNA-seq batch correction
M Büttner, Z Miao, FA Wolf, SA Teichmann, FJ Theis
Nature methods 16 (1), 43-49, 2019
Mandates: German Research Foundation, Helmholtz Association, Wellcome Trust
Review
Single-cell RNA-seq identifies a PD-1hi ILC progenitor and defines its development pathway
Y Yu, JCH Tsang, C Wang, S Clare, J Wang, X Chen, C Brandt, L Kane, ...
Nature 539 (7627), 102-106, 2016
Mandates: Australian Research Council, National Health and Medical Research Council …
Review
Parallel dynamics and evolution: Protein conformational fluctuations and assembly reflect evolutionary changes in sequence and structure
JA Marsh, SA Teichmann
BioEssays 36 (2), 209-218, 2014
Mandates: UK Medical Research Council
Review
Single-cell transcriptomics for the assessment of cardiac disease
AMA Miranda, V Janbandhu, H Maatz, K Kanemaru, J Cranley, ...
Nature Reviews Cardiology 20 (5), 289-308, 2023
Mandates: National Health and Medical Research Council, Australia, German Research …
Review
Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory
MSF Soon, HJ Lee, JA Engel, J Straube, BS Thomas, CPS Pernold, ...
Nature Immunology 21 (12), 1597-1610, 2020
Mandates: National Health and Medical Research Council, Australia, European Commission
Review
Single cell transcriptomics of pluripotent stem cells: reprogramming and differentiation
KN Natarajan, SA Teichmann, AA Kolodziejczyk
Current Opinion in Genetics & Development 46, 66-76, 2017
Mandates: UK Biotechnology and Biological Sciences Research Council, Wellcome Trust …
Review
High-throughput full-length single-cell RNA-seq automation
L Mamanova, Z Miao, A Jinat, P Ellis, L Shirley, SA Teichmann
Nature Protocols 16 (6), 2886-2915, 2021
Mandates: Wellcome Trust, European Commission
Review
How do you find transcription factors? Computational approaches to compile and annotate repertoires of regulators for any genome
JM Vaquerizas, SA Teichmann, NM Luscombe
Gene Regulatory Networks: Methods and Protocols, 3-19, 2011
Mandates: Cancer Research UK
Review
The Human Cell Atlas from a cell census to a unified foundation model
JE Rood, S Wynne, L Robson, A Hupalowska, J Randell, SA Teichmann, ...
Nature, 1-2, 2024
Mandates: Chan Zuckerberg Initiative
Review
Single-cell insights into transcriptomic diversity in immunity
RJ Miragaia, SA Teichmann, T Hagai
Current Opinion in Systems Biology 5, 63-71, 2017
Mandates: Fundação para a Ciência e a Tecnologia, Portugal, Human Frontier Science Program
Review
Considerations for building and using integrated single-cell atlases
K Hrovatin, L Sikkema, VA Shitov, G Heimberg, M Shulman, AJ Oliver, ...
Nature Methods, 1-17, 2024
Mandates: European Commission, Chan Zuckerberg Initiative
Review
How developmental cell atlases inform stem cell embryo models
M Haniffa, A Maartens, SA Teichmann
Nature Methods 20 (12), 1849-1851, 2023
Mandates: National Institute for Health Research, UK, Wellcome Trust
Available somewhere: 289
Review
SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes
W Sungnak, N Huang, C Bécavin, M Berg, R Queen, M Litvinukova, ...
Nature medicine 26 (5), 681-687, 2020
Mandates: US Department of Defense, US National Institutes of Health, Howard Hughes …
Review
SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues
CGK Ziegler, SJ Allon, SK Nyquist, IM Mbano, VN Miao, CN Tzouanas, ...
Cell 181 (5), 1016-1035. e19, 2020
Mandates: US National Science Foundation, Bill & Melinda Gates Foundation, US …
Review
CellPhoneDB: inferring cell–cell communication from combined expression of multi-subunit ligand–receptor complexes
M Efremova, M Vento-Tormo, SA Teichmann, R Vento-Tormo
Nature protocols 15 (4), 1484-1506, 2020
Mandates: Wellcome Trust
Review
The human cell atlas
A Regev, SA Teichmann, ES Lander, I Amit, C Benoist, E Birney, ...
elife 6, e27041, 2017
Mandates: US National Institutes of Health, UK Biotechnology and Biological Sciences …
Review
Targeting CXCL12 from FAP-expressing carcinoma-associated fibroblasts synergizes with anti–PD-L1 immunotherapy in pancreatic cancer
C Feig, JO Jones, M Kraman, RJB Wells, A Deonarine, DS Chan, ...
Proceedings of the National Academy of Sciences 110 (50), 20212-20217, 2013
Mandates: Cancer Research UK, UK Medical Research Council, Wellcome Trust
Review
Single-cell reconstruction of the early maternal–fetal interface in humans
R Vento-Tormo, M Efremova, RA Botting, MY Turco, M Vento-Tormo, ...
Nature 563 (7731), 347-353, 2018
Mandates: European Molecular Biology Laboratory, UK Medical Research Council, Wellcome …
Review
Common variants near MC4R are associated with fat mass, weight and risk of obesity
RJF Loos, CM Lindgren, S Li, E Wheeler, JH Zhao, I Prokopenko, ...
Nature genetics 40 (6), 768-775, 2008
Mandates: US National Institutes of Health, British Heart Foundation, Cancer Research UK
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