| MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020 | 413 | 2020 |
| A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism H Lu, F Li, BJ Sánchez, Z Zhu, G Li, I Domenzain, S Marcišauskas, ... Nature communications 10 (1), 1-13, 2019 | 340 | 2019 |
| The ModelSEED Database for the integration of metabolic annotations and the reconstruction, comparison, and analysis of metabolic models for plants, fungi, and microbes SMD Seaver, F Liu, Q Zhang, J Jeffryes, JP Faria, J Edirisinghe, M Mundy, ... BioRxiv, 2020 | 211* | 2020 |
| Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories JGR Cardoso, K Jensen, C Lieven, AS Lærke Hansen, S Galkina, ... ACS synthetic biology 7 (4), 1163-1166, 2018 | 73 | 2018 |
| Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... BioRxiv, 350991, 2018 | 60 | 2018 |
| Community standards to facilitate development and address challenges in metabolic modeling MA Carey, A Dräger, ME Beber, JA Papin, JT Yurkovich Molecular Systems Biology 16 (8), e9235, 2020 | 49 | 2020 |
| Artefacts in statistical analyses of network motifs: general framework and application to metabolic networks ME Beber, C Fretter, S Jain, N Sonnenschein, M Müller-Hannemann, ... Journal of the Royal Society Interface 9 (77), 3426-3435, 2012 | 47 | 2012 |
| Flow control by periodic devices: a unifying language for the description of traffic, production, and metabolic systems T Becker, ME Beber, K Windt, MT Hütt, D Helbing Journal of Statistical Mechanics: Theory and Experiment 2011 (05), P05004, 2011 | 29 | 2011 |
| ToxDB: pathway-level interpretation of drug-treatment data C Hardt, ME Beber, A Rasche, A Kamburov, DG Hebels, JC Kleinjans, ... Database 2016, 2016 | 27 | 2016 |
| The impact of network connectivity on performance in production logistic networks T Becker, ME Beber, K Windt, MT Hütt CIRP Journal of Manufacturing Science and Technology 5 (4), 309-318, 2012 | 24 | 2012 |
| Towards an Understanding of the Relation between Topological Characteristics and Dynamic Behavior in Manufacturing Networks ME Beber, T Becker Procedia CIRP 19, 21-26, 2014 | 16 | 2014 |
| Effect of database drift on network topology and enrichment analyses: a case study for RegulonDB ME Beber, G Muskhelishvili, MT Hütt Database 2016, baw003, 2016 | 11 | 2016 |
| Interplay of digital and analog control in time-resolved gene expression profiles ME Beber, P Sobetzko, G Muskhelishvili, MT Hütt EPJ Nonlinear Biomedical Physics 4 (1), 8, 2016 | 10 | 2016 |
| A comparison of network characteristics in metabolic and manufacturing systems T Becker, M Meyer, ME Beber, K Windt, MT Hütt Dynamics in Logistics, 141-150, 2013 | 8 | 2013 |
| The prescribed output pattern regulates the modular structure of flow networks ME Beber, D Armbruster, MT Hütt The European Physical Journal B 86 (11), 1-9, 2013 | 7 | 2013 |
| Flow Control in Production Logistic Networks T Becker, M Beber, K Windt, MT Hütt Proceedings of the 44th CIRP International Conference on Manufacturing Systems, 2011 | 6 | 2011 |
| Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite. bioRxiv C Lieven, ME Beber, BG Olivier, FT Bergmann, P Babaei, JA Bartell, ... Academic Search, 2018 | 5 | 2018 |
| How Do Production Systems in Biological Cells Maintain Their Function in Changing Environments? ME Beber, MT Hütt Robust Manufacturing Control, 3-16, 2013 | 5 | 2013 |
| dfba: Software for efficient simulation of dynamic flux-balance analysis models in Python DS Tourigny, JC Muriel, ME Beber Journal of Open Source Software 5 (52), 2342, 2020 | 4 | 2020 |
| Network heterogeneity and node capacity lead to heterogeneous scaling of fluctuations in random walks on graphs K Kosmidis, M Beber, MT Hütt Advances in Complex Systems 18 (01n02), 1550007, 2015 | 3 | 2015 |
Christian LievenNovo Nordisk Foundation Center for BiosustainabilityVerified email at biosustain.dtu.dk