COCONUT online: collection of open natural products database M Sorokina, P Merseburger, K Rajan, MA Yirik, C Steinbeck Journal of Cheminformatics 13 (1), 2, 2021 | 439 | 2021 |
Surge: a fast open-source chemical graph generator BD McKay, MA Yirik, C Steinbeck Journal of Cheminformatics 14 (1), 24, 2022 | 25 | 2022 |
COCONUT online: collection of open natural products database. J Cheminform 13: 2 M Sorokina, P Merseburger, K Rajan, MA Yirik, C Steinbeck | 22 | 2021 |
MAYGEN-an open-source chemical structure generator for constitutional isomers based on the orderly generation principle MA Yirik, M Sorokina, C Steinbeck | 18 | 2021 |
COCONUT online: collection of open natural products database. J Cheminformatics 13 (1): 2 M Sorokina, P Merseburger, K Rajan, MA Yirik, C Steinbeck | 11 | 2021 |
Chemical graph generators MA Yirik, C Steinbeck PLOS Computational Biology 17 (1), e1008504, 2021 | 8 | 2021 |
Review on chemical graph theory and its application in computer-assisted structure elucidation MA Yirik, KE Colpan, S Schmidt, M Sorokina, C Steinbeck Preprints, 2021 | 7 | 2021 |
Generation of weighted trees, block trees and block graphs T Ekim, M Shalom, MA Yirik arXiv preprint arXiv:2401.09764, 2024 | 1 | 2024 |
Curation of computational chemical libraries demonstrated with alpha-amino acids C Mayer-Bacon, MA Yirik JoVE (Journal of Visualized Experiments), e63632, 2022 | 1 | 2022 |
Development of efficient open-cource chemical graph generators M Yirik | | 2023 |
Development of a data collection and analysis tool for protein-ligand interactions MA Yirik Bogazici University, 2017 | | 2017 |
Users’ manual for molecule generator surge BD McKay, C Steinbeck, MA Yirik | | |
Chemical Graph Theory MA Yirik, KE Colpan, S Schmidt, M Sorokina, C Steinbeck | | |
Chemical graph generators MA Yirik, C Steinbeck | | |