| Architecture and mechanism of the light-harvesting apparatus of purple bacteria X Hu, A Damjanović, T Ritz, K Schulten Proceedings of the National Academy of Sciences 95 (11), 5935-5941, 1998 | 552 | 1998 |
| Photosynthetic apparatus of purple bacteria X Hu, T Ritz, A Damjanović, F Autenrieth, K Schulten Quarterly reviews of biophysics 35 (1), 1-62, 2002 | 487 | 2002 |
| Pigment organization and transfer of electronic excitation in the photosynthetic unit of purple bacteria X Hu, T Ritz, A Damjanović, K Schulten The Journal of Physical Chemistry B 101 (19), 3854-3871, 1997 | 373 | 1997 |
| Excitons in a photosynthetic light-harvesting system: a combined molecular dynamics, quantum chemistry, and polaron model study A Damjanović, I Kosztin, U Kleinekathöfer, K Schulten Physical Review E 65 (3), 031919, 2002 | 357 | 2002 |
| Energy transfer between carotenoids and bacteriochlorophylls in light-harvesting complex II of purple bacteria A Damjanović, T Ritz, K Schulten Physical Review E 59 (3), 3293, 1999 | 211 | 1999 |
| Efficient light harvesting through carotenoids T Ritz, A Damjanović, K Schulten, JP Zhang, Y Koyama Photosynthesis Research 66, 125-144, 2000 | 200 | 2000 |
| Energy transfer in photosystem I of cyanobacteria Synechococcus elongatus: model study with structure-based semi-empirical Hamiltonian and experimental spectral density M Yang, A Damjanović, HM Vaswani, GR Fleming Biophysical journal 85 (1), 140-158, 2003 | 195 | 2003 |
| Chlorophyll Excitations in Photosystem I of Synechococcus elongatus A Damjanović, HM Vaswani, P Fromme, GR Fleming The Journal of Physical Chemistry B 106 (39), 10251-10262, 2002 | 184 | 2002 |
| The quantum physics of photosynthesis T Ritz, A Damjanović, K Schulten ChemPhysChem 3 (3), 243-248, 2002 | 177 | 2002 |
| Excitation transfer in the peridinin-chlorophyll-protein of Amphidinium carterae A Damjanović, T Ritz, K Schulten Biophysical journal 79 (4), 1695-1705, 2000 | 162 | 2000 |
| pH replica‐exchange method based on discrete protonation states SG Itoh, A Damjanović, BR Brooks Proteins: Structure, Function, and Bioinformatics 79 (12), 3420-3436, 2011 | 156 | 2011 |
| A buried lysine that titrates with a normal pKa: Role of conformational flexibility at the protein–water interface as a determinant of pKavalues MJ Harms, JL Schlessman, MS Chimenti, GR Sue, A Damjanović, ... Protein Science 17 (5), 833-845, 2008 | 103 | 2008 |
| Excitation migration in trimeric cyanobacterial photosystem I MK Şener, S Park, D Lu, A Damjanović, T Ritz, P Fromme, K Schulten The Journal of chemical physics 120 (23), 11183-11195, 2004 | 103 | 2004 |
| Molecular dynamics study of water penetration in staphylococcal nuclease A Damjanović, B García‐Moreno, EE Lattman, AE García Proteins: Structure, Function, and Bioinformatics 60 (3), 433-449, 2005 | 97 | 2005 |
| Dynamics of tRNA at different levels of hydration JH Roh, RM Briber, A Damjanovic, D Thirumalai, SA Woodson, ... Biophysical journal 96 (7), 2755-2762, 2009 | 95 | 2009 |
| Constant pH molecular dynamics in explicit solvent with enveloping distribution sampling and Hamiltonian exchange J Lee, BT Miller, A Damjanovic, BR Brooks Journal of chemical theory and computation 10 (7), 2738-2750, 2014 | 85 | 2014 |
| Excitation energy trapping by the reaction center of Rhodobacter Sphaeroides A Damjanović, T Ritz, K Schulten International Journal of Quantum Chemistry 77 (1), 139-151, 2000 | 71 | 2000 |
| Backbone relaxation coupled to the ionization of internal groups in proteins: a self-guided Langevin dynamics study A Damjanović, X Wu, BR Brooks Biophysical journal 95 (9), 4091-4101, 2008 | 61 | 2008 |
| Theoretical prediction of spectral and optical properties of bacteriochlorophylls in thermally disordered LH2 antenna complexes L Janosi, I Kosztin, A Damjanović The Journal of chemical physics 125 (1), 2006 | 58 | 2006 |
| Conformational relaxation and water penetration coupled to ionization of internal groups in proteins A Damjanović, BR Brooks, B García-Moreno E The Journal of Physical Chemistry A 115 (16), 4042-4053, 2011 | 56 | 2011 |