| An empirical framework for binary interactome mapping K Venkatesan, JF Rual, A Vazquez, U Stelzl, I Lemmens, ... Nature methods 6 (1), 83-90, 2009 | 1069 | 2009 |
| An integrative approach to ortholog prediction for disease-focused and other functional studies Y Hu, I Flockhart, A Vinayagam, C Bergwitz, B Berger, N Perrimon, ... BMC bioinformatics 12, 1-16, 2011 | 767 | 2011 |
| A directed protein interaction network for investigating intracellular signal transduction A Vinayagam, U Stelzl, R Foulle, S Plassmann, M Zenkner, J Timm, ... Science signaling 4 (189), rs8-rs8, 2011 | 419 | 2011 |
| HIPPIE: Integrating protein interaction networks with experiment based quality scores MH Schaefer, JF Fontaine, A Vinayagam, P Porras, EE Wanker, ... PloS one 7 (2), e31826, 2012 | 408 | 2012 |
| Controllability analysis of the directed human protein interaction network identifies disease genes and drug targets A Vinayagam, TE Gibson, HJ Lee, B Yilmazel, C Roesel, Y Hu, Y Kwon, ... Proceedings of the National Academy of Sciences 113 (18), 4976-4981, 2016 | 266 | 2016 |
| The Hippo signaling pathway interactome Y Kwon, A Vinayagam, X Sun, N Dephoure, SP Gygi, P Hong, N Perrimon Science 342 (6159), 737-740, 2013 | 183 | 2013 |
| Integrating protein-protein interaction networks with phenotypes reveals signs of interactions A Vinayagam, J Zirin, C Roesel, Y Hu, B Yilmazel, AA Samsonova, ... Nature methods 11 (1), 94-99, 2014 | 156 | 2014 |
| A regulatory network of Drosophila germline stem cell self-renewal D Yan, RA Neumüller, M Buckner, K Ayers, H Li, Y Hu, D Yang-Zhou, ... Developmental cell 28 (4), 459-473, 2014 | 145 | 2014 |
| Applying support vector machines for gene ontology based gene function prediction A Vinayagam, R König, J Moormann, F Schubert, R Eils, KH Glatting, ... BMC bioinformatics 5, 1-14, 2004 | 119 | 2004 |
| Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal–regulated kinase signaling AA Friedman, G Tucker, R Singh, D Yan, A Vinayagam, Y Hu, R Binari, ... Science signaling 4 (196), rs10-rs10, 2011 | 112 | 2011 |
| Protein complex–based analysis framework for high-throughput data sets A Vinayagam, Y Hu, M Kulkarni, C Roesel, R Sopko, SE Mohr, ... Science signaling 6 (264), rs5-rs5, 2013 | 111 | 2013 |
| An integrative analysis of the InR/PI3K/Akt network identifies the dynamic response to insulin signaling A Vinayagam, MM Kulkarni, R Sopko, X Sun, Y Hu, A Nand, C Villalta, ... Cell reports 16 (11), 3062-3074, 2016 | 88 | 2016 |
| Conserved regulators of nucleolar size revealed by global phenotypic analyses RA Neumüller, T Gross, AA Samsonova, A Vinayagam, M Buckner, ... Science signaling 6 (289), ra70-ra70, 2013 | 87 | 2013 |
| Molecular Interaction Search Tool (MIST): an integrated resource for mining gene and protein interaction data Y Hu, A Vinayagam, A Nand, A Comjean, V Chung, T Hao, SE Mohr, ... Nucleic acids research 46 (D1), D567-D574, 2018 | 81 | 2018 |
| GOPET: a tool for automated predictions of Gene Ontology terms A Vinayagam, C del Val, F Schubert, R Eils, KH Glatting, S Suhai, R König BMC bioinformatics 7, 1-7, 2006 | 81 | 2006 |
| Global gene expression profiling and cluster analysis in Xenopus laevis D Baldessari, Y Shin, O Krebs, R König, T Koide, A Vinayagam, U Fenger, ... Mechanisms of Development 122 (3), 441-475, 2005 | 79 | 2005 |
| Combining genetic perturbations and proteomics to examine kinase-phosphatase networks in Drosophila embryos R Sopko, M Foos, A Vinayagam, B Zhai, R Binari, Y Hu, S Randklev, ... Developmental cell 31 (1), 114-127, 2014 | 72 | 2014 |
| Proteomic and metabolomic characterization of a mammalian cellular transition from quiescence to proliferation HJ Lee, MP Jedrychowski, A Vinayagam, N Wu, N Shyh-Chang, Y Hu, ... Cell reports 20 (3), 721-736, 2017 | 55 | 2017 |
| A computational framework for boosting confidence in high-throughput protein-protein interaction datasets R Hosur, J Peng, A Vinayagam, U Stelzl, J Xu, N Perrimon, J Bienkowska, ... Genome biology 13, 1-14, 2012 | 55 | 2012 |
| FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2017 update Y Hu, A Comjean, C Roesel, A Vinayagam, I Flockhart, J Zirin, L Perkins, ... Nucleic acids research, gkw977, 2016 | 50 | 2016 |
Claire (Yanhui) HuHarvard Medical SchoolVerified email at hms.harvard.edu
