| Phylogenomic analyses support traditional relationships within Cnidaria F Zapata, FE Goetz, SA Smith, M Howison, S Siebert, SH Church, ... PloS one 10 (10), e0139068, 2015 | 238 | 2015 |
| Plant Ontology (PO): a controlled vocabulary of plant structures and growth stages P Jaiswal, S Avraham, K Ilic, EA Kellogg, S McCouch, A Pujar, L Reiser, ... Comparative and functional genomics 6 (7‐8), 388-397, 2005 | 226 | 2005 |
| The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations S Avraham, CW Tung, K Ilic, P Jaiswal, EA Kellogg, S McCouch, A Pujar, ... Nucleic acids research 36 (suppl_1), D449-D454, 2008 | 218 | 2008 |
| Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda F Zapata, NG Wilson, M Howison, SCS Andrade, KM Jörger, M Schrödl, ... Proceedings of the Royal Society B: Biological Sciences 281 (1794), 20141739, 2014 | 211 | 2014 |
| Agalma: an automated phylogenomics workflow CW Dunn, M Howison, F Zapata BMC bioinformatics 14, 1-9, 2013 | 158 | 2013 |
| The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant K Ilic, EA Kellogg, P Jaiswal, F Zapata, PF Stevens, LP Vincent, ... Plant physiology 143 (2), 587-599, 2007 | 135 | 2007 |
| To move or to evolve: contrasting patterns of intercontinental connectivity and climatic niche evolution in “Terebinthaceae”(Anacardiaceae and Burseraceae) A Weeks, F Zapata, SK Pell, DC Daly, JD Mitchell, PVA Fine Frontiers in Genetics 5, 409, 2014 | 123 | 2014 |
| Investigating processes of neotropical rain forest tree diversification by examining the evolution and historical biogeography of the Protieae (Burseraceae) PVA Fine, F Zapata, DC Daly Evolution 68 (7), 1988-2004, 2014 | 120 | 2014 |
| Species Delimitation: Inferring Gaps in Morphology across Geography F Zapata, I Jiménez Systematic Biology 61 (2), 179-194, 2012 | 120 | 2012 |
| Pairwise comparisons across species are problematic when analyzing functional genomic data CW Dunn, F Zapata, C Munro, S Siebert, A Hejnol Proceedings of the National Academy of Sciences 115 (3), E409-E417, 2018 | 105 | 2018 |
| Issues and perspectives in species delimitation using phenotypic data: Atlantean evolution in Darwin’s finches CD Cadena, F Zapata, I Jiménez Systematic Biology 67 (2), 181-194, 2018 | 82 | 2018 |
| Whole-plant growth stage ontology for angiosperms and its application in plant biology A Pujar, P Jaiswal, EA Kellogg, K Ilic, L Vincent, S Avraham, P Stevens, ... Plant Physiology 142 (2), 414-428, 2006 | 67 | 2006 |
| The importance of environmental heterogeneity and spatial distance in generating phylogeographic structure in edaphic specialist and generalist tree species of Protium … PVA Fine, F Zapata, DC Daly, I Mesones, TM Misiewicz, HF Cooper, ... Journal of Biogeography, 2013 | 55 | 2013 |
| Plant science decadal vision 2020–2030: Reimagining the potential of plants for a healthy and sustainable future N Henkhaus, M Bartlett, D Gang, R Grumet, I Jordon‐Thaden, A Lorence, ... Plant direct 4 (8), e00252, 2020 | 48 | 2020 |
| The genomic revolution and species delimitation in birds (and other organisms): Why phenotypes should not be overlooked CD Cadena, F Zapata The Auk 138 (2), ukaa069, 2021 | 35 | 2021 |
| A multilocus phylogenetic analysis of Escallonia (Escalloniaceae): Diversification in montane South America F Zapata American Journal of Botany 100 (3), 526-545, 2013 | 33 | 2013 |
| Improved phylogenetic resolution within Siphonophora (Cnidaria) with implications for trait evolution C Munro, S Siebert, F Zapata, M Howison, A Damian-Serrano, SH Church, ... Molecular phylogenetics and evolution 127, 823-833, 2018 | 32 | 2018 |
| Evolution of gene expression across species and specialized zooids in Siphonophora C Munro, F Zapata, M Howison, S Siebert, CW Dunn Molecular Biology and Evolution 39 (2), msac027, 2022 | 30 | 2022 |
| Natural selection maintains species despite frequent hybridization in the desert shrub Encelia CT DiVittorio, S Singhal, AB Roddy, F Zapata, DD Ackerly, BG Baldwin, ... Proceedings of the National Academy of Sciences 117 (52), 33373-33383, 2020 | 30 | 2020 |
| Relict inland mangrove ecosystem reveals Last Interglacial sea levels O Aburto-Oropeza, CM Burelo-Ramos, E Ezcurra, P Ezcurra, ... Proceedings of the National Academy of Sciences 118 (41), e2024518118, 2021 | 29 | 2021 |
Casey William DunnProfessor of Ecology and Evolutionary Biology, Yale UniversityVerified email at yale.edu