Unbiased Strain-Typing of Arbovirus Directly from Mosquitoes Using Nanopore Sequencing: A Field-forward Biosurveillance Protocol JA Russell, B Campos, J Stone, EM Blosser, N Burkett-Cadena, ... Scientific reports 8 (1), 5417, 2018 | 58 | 2018 |
Prokaryote populations of extant microbialites along a depth gradient in Pavilion Lake, British Columbia, Canada JA Russell, AL Brady, Z Cardman, GF Slater, DSS Lim, JF Biddle Geobiology 12 (3), 250-264, 2014 | 41 | 2014 |
Deep subsurface life from north pond: enrichment, isolation, characterization and genomes of heterotrophic bacteria JA Russell, R León-Zayas, K Wrighton, JF Biddle Frontiers in microbiology 7, 184024, 2016 | 27 | 2016 |
Molecular detection of biological agents in the field: Then and now KB Yeh, H Wood, M Scullion, JA Russell, K Parker, BT Gnade, AR Jones, ... Msphere 4 (6), 10.1128/msphere. 00695-19, 2019 | 12 | 2019 |
Development and optimization of an unbiased, metagenomics-based pathogen detection workflow for infectious disease and biosurveillance applications K Parker, H Wood, JA Russell, D Yarmosh, A Shteyman, J Bagnoli, ... Tropical Medicine and Infectious Disease 8 (2), 121, 2023 | 11 | 2023 |
PanGIA: a metagenomics analytical framework for routine biosurveillance and clinical pathogen detection PE Li, JA Russell, D Yarmosh, AG Shteyman, K Parker, H Wood, ... bioRxiv, 2020.04. 20.051813, 2020 | 5 | 2020 |
Amplicon Sequencing Minimal Information (ASqMI): Quality and Reporting Guidelines for Actionable Calls in Biodefense Applications I Keenum, R Player, J Kralj, S Servetas, MD Sussman, JA Russell, J Stone, ... Journal of AOAC International 106 (5), 1424-1430, 2023 | 2 | 2023 |
A genotype-to-phenotype modeling framework to predict human pathogenicity of novel coronaviruses P Davis, JA Russell bioRxiv, 2021.09. 18.460926, 2021 | 2 | 2021 |
Vorpal: a novel RNA virus feature-extraction algorithm demonstrated through interpretable genotype-to-phenotype linear models P Davis, J Bagnoli, D Yarmosh, A Shteyman, L Presser, S Altmann, ... bioRxiv, 2020.02. 28.969782, 2020 | 2 | 2020 |
Modular mobile field-deployable laboratory for the detection, sequencing and analysis of emerging infectious diseases JL Jacobs, JA Russell, JR Aspinwall US Patent App. 15/866,073, 2018 | 1 | 2018 |
Active populations and preserved signals: molecular-and cultivation-based geobiological analyses from microbialites to the marine deep biosphere JA Russell III University of Delaware, 2015 | 1 | 2015 |
AMAnD: an automated metagenome anomaly detection methodology utilizing DeepSVDD neural networks C Price, JA Russell Frontiers in Public Health 11, 1181911, 2023 | | 2023 |