Disentangling the genetic basis of rhizosphere microbiome assembly in tomato BO Oyserman, SS Flores, T Griffioen, X Pan, E Van Der Wijk, L Pronk, ... Nature communications 13 (1), 3228, 2022 | 88 | 2022 |
A chimeric RNA characteristic of rhabdomyosarcoma in normal myogenesis process H Yuan, F Qin, M Movassagh, H Park, W Golden, Z Xie, P Zhang, J Sklar, ... Cancer discovery 3 (12), 1394-1403, 2013 | 82 | 2013 |
Human and Epstein-barr virus miRNA profiling as predictive biomarkers for endemic Burkitt lymphoma CI Oduor, M Movassagh, Y Kaymaz, K Chelimo, J Otieno, JM Ong'Echa, ... Frontiers in microbiology 8, 501, 2017 | 29 | 2017 |
Systematic pan-cancer analysis of somatic allele frequency L Spurr, M Li, N Alomran, Q Zhang, P Restrepo, M Movassagh, C Trenkov, ... Scientific reports 8 (1), 7735, 2018 | 24 | 2018 |
SCReadCounts: estimation of cell-level SNVs expression from scRNA-seq data NM Prashant, N Alomran, Y Chen, H Liu, P Bousounis, M Movassagh, ... BMC genomics 22, 1-9, 2021 | 21 | 2021 |
SNPlice: variants that modulate Intron retention from RNA-sequencing data P Mudvari, M Movassagh, K Kowsari, A Seyfi, M Kokkinaki, NJ Edwards, ... Bioinformatics 31 (8), 1191-1198, 2015 | 18 | 2015 |
RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data M Movassagh, N Alomran, P Mudvari, M Dede, C Dede, K Kowsari, ... Nucleic acids research 44 (22), e161-e161, 2016 | 17 | 2016 |
Two methods for establishing primary human endometrial stromal cells from hysterectomy specimens K Jividen, MJ Movassagh, A Jazaeri, H Li Journal of Visualized Experiments: JoVE, 51513, 2014 | 15 | 2014 |
Vaginal microbiome topic modeling of laboring Ugandan women with and without fever M Movassagh, LM Bebell, K Burgoine, C Hehnly, L Zhang, K Moran, ... npj Biofilms and Microbiomes 7 (1), 75, 2021 | 13 | 2021 |
A chimeric RNA characteristic of rhabdomyosarcoma in normal myogenesis process. Cancer Discov. 2013; 3: 1394–1403. doi: 10.1158/2159-8290 H Yuan, F Qin, M Movassagh, H Park, W Golden, Z Xie, P Zhang, J Sklar, ... CD-13-0186.[Abstract][CrossRef][Academic Search], 0 | 13 | |
Immune activation during Paenibacillus brain infection in African infants with frequent cytomegalovirus co-infection AM Isaacs, SU Morton, M Movassagh, Q Zhang, C Hehnly, L Zhang, ... Iscience 24 (4), 2021 | 12 | 2021 |
Sensitive detection of EBV microRNAs across cancer spectrum reveals association with decreased survival in adult acute myelocytic leukemia M Movassagh, C Oduor, C Forconi, AM Moormann, JA Bailey Scientific Reports 9 (1), 20321, 2019 | 10 | 2019 |
Paenibacillus Infection Causes Neonatal Sepsis and Subsequent Postinfectious Hydrocephalus in Ugandan Infants SU Morton, C Hehnly, K Burgoine, P Ssentongo, JE Ericson, MS Kumar, ... | 7 | 2022 |
Neonatal Paenibacilliosis: Paenibacillus Infection as a Novel Cause of Sepsis in Term Neonates With High Risk of Sequelae in Uganda JE Ericson, K Burgoine, E Kumbakumba, M Ochora, C Hehnly, ... Clinical Infectious Diseases 77 (5), 768-775, 2023 | 6 | 2023 |
mirTarRnaSeq: an R/bioconductor statistical package for miRNA-mRNA target identification and interaction analysis M Movassagh, SU Morton, C Hehnly, J Smith, TT Doan, R Irizarry, ... BMC genomics 23 (1), 439, 2022 | 6 | 2022 |
Paenibacillus spp infection among infants with postinfectious hydrocephalus in Uganda: an observational case-control study SU Morton, C Hehnly, K Burgoine, P Ssentongo, JE Ericson, MS Kumar, ... The Lancet Microbe 4 (8), e601-e611, 2023 | 5 | 2023 |
Co-Occurrence of COMT and BRCA1/2 Variants in a Population M Movassagh, P Mudvari, A Horvath New England Journal of Medicine 376 (21), 2090-2091, 2017 | 5 | 2017 |
Immune activation during AM Isaacs, SU Morton, M Movassagh, Q Zhang, C Hehnly Paenibacillus, 0 | 5 | |
Overexpressed somatic alleles are enriched in functional elements in Breast Cancer P Restrepo, M Movassagh, N Alomran, C Miller, M Li, C Trenkov, ... Scientific Reports 7 (1), 8287, 2017 | 4 | 2017 |
mbQTL: an R/Bioconductor package for microbial quantitative trait loci (QTL) estimation M Movassagh, SJ Schiff, JN Paulson Bioinformatics 39 (9), btad565, 2023 | 3 | 2023 |