Articles with public access mandates - Junichi TsujiiLearn more
Not available anywhere: 1
The genia corpus: Annotation levels and applications
P Thompson, S Ananiadou, J Tsujii
Handbook of Linguistic Annotation, 1395-1432, 2017
Mandates: UK Biotechnology and Biological Sciences Research Council, UK Engineering …
Available somewhere: 16
Overview of the cancer genetics and pathway curation tasks of bionlp shared task 2013
S Pyysalo, T Ohta, R Rak, A Rowley, HW Chun, SJ Jung, SP Choi, J Tsujii, ...
BMC bioinformatics 16, 1-19, 2015
Mandates: UK Biotechnology and Biological Sciences Research Council
Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011
S Pyysalo, T Ohta, R Rak, D Sullivan, C Mao, C Wang, B Sobral, J Tsujii, ...
BMC bioinformatics 13, 1-26, 2012
Mandates: US National Institutes of Health
U-Compare: share and compare text mining tools with UIMA
Y Kano, WA Baumgartner Jr, L McCrohon, S Ananiadou, KB Cohen, ...
Bioinformatics 25 (15), 1997-1998, 2009
Mandates: US National Institutes of Health
An end-to-end system to identify temporal relation in discharge summaries: 2012 i2b2 challenge
Y Xu, Y Wang, T Liu, J Tsujii, EIC Chang
Journal of the American Medical Informatics Association 20 (5), 849-858, 2013
Mandates: US National Institutes of Health
Bilingual term alignment from comparable corpora in english discharge summary and chinese discharge summary
Y Xu, L Chen, J Wei, S Ananiadou, Y Fan, Y Qian, EIC Chang, J Tsujii
BMC bioinformatics 16, 1-10, 2015
Mandates: National Natural Science Foundation of China, UK Engineering and Physical …
Mapping anatomical related entities to human body parts based on wikipedia in discharge summaries
Y Wang, X Fan, L Chen, EIC Chang, S Ananiadou, J Tsujii, Y Xu
BMC bioinformatics 20, 1-11, 2019
Mandates: National Natural Science Foundation of China, UK Medical Research Council
Annotation and detection of drug effects in text for pharmacovigilance
P Thompson, S Daikou, K Ueno, R Batista-Navarro, J Tsujii, S Ananiadou
Journal of cheminformatics 10, 1-33, 2018
Mandates: UK Biotechnology and Biological Sciences Research Council, UK Engineering …
A classification approach to coreference in discharge summaries: 2011 i2b2 challenge
Y Xu, J Liu, J Wu, Y Wang, Z Tu, JT Sun, J Tsujii, EIC Chang
Journal of the American Medical Informatics Association 19 (5), 897-905, 2012
Mandates: US National Institutes of Health
Named entity recognition for bacterial type IV secretion systems
S Ananiadou, D Sullivan, W Black, GA Levow, JJ Gillespie, C Mao, ...
PLoS One 6 (3), e14780, 2011
Mandates: US National Institutes of Health
U-Compare bio-event meta-service: compatible BioNLP event extraction services
Y Kano, J Björne, F Ginter, T Salakoski, E Buyko, U Hahn, KB Cohen, ...
BMC bioinformatics 12, 1-9, 2011
Mandates: US National Institutes of Health, Research Foundation (Flanders), Government …
Anatomical entity recognition with a hierarchical framework augmented by external resources
Y Xu, J Hua, Z Ni, Q Chen, Y Fan, S Ananiadou, EIC Chang, J Tsujii
PloS one 9 (10), e108396, 2014
Mandates: National Natural Science Foundation of China, UK Medical Research Council
Towards event extraction from full texts on infectious diseases
S Pyysalo, T Ohta, HC Cho, D Sullivan, C Mao, B Sobral, J Tsujii, ...
Proceedings of the 2010 Workshop on Biomedical Natural Language Processing …, 2010
Mandates: US National Institutes of Health
Learning abbreviations from chinese and english terms by modeling non-local information
X Sun, N Okazaki, J Tsujii, H Wang
ACM Transactions on Asian Language Information Processing (TALIP) 12 (2), 1-17, 2013
Mandates: Research Grants Council, Hong Kong
Distributed document and phrase co-embeddings for descriptive clustering
M Sato, AJ Brockmeier, G Kontonatsios, T Mu, JY Goulermas, J Tsujii, ...
Proceedings of the 15th Conference of the European Chapter of the …, 2017
Mandates: UK Medical Research Council
DISCOVERING ROBUST EMBEDDINGS IN (DIS) SIMILARITY SPACE FOR HIGH‐DIMENSIONAL LINGUISTIC FEATURES
T Mu, M Miwa, J Tsujii, S Ananiadou
Computational Intelligence 30 (2), 285-315, 2014
Mandates: UK Biotechnology and Biological Sciences Research Council
Proceedings of BioNLP 15
KB Cohen, D Demner-Fushman, S Ananiadou, J Tsujii
Proceedings of BioNLP 15, 2015
Mandates: US National Institutes of Health
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