QuPath: Open source software for digital pathology image analysis P Bankhead, MB Loughrey, JA Fernández, Y Dombrowski, DG McArt, ... Scientific reports 7 (1), 1-7, 2017 | 6266 | 2017 |
Pan-cancer image-based detection of clinically actionable genetic alterations JN Kather, LR Heij, HI Grabsch, C Loeffler, A Echle, HS Muti, J Krause, ... Nature cancer 1 (8), 789-799, 2020 | 523 | 2020 |
Regulatory T cells promote myelin regeneration in the central nervous system Y Dombrowski, T O'hagan, M Dittmer, R Penalva, SR Mayoral, ... Nature neuroscience 20 (5), 674-680, 2017 | 443 | 2017 |
Fast retinal vessel detection and measurement using wavelets and edge location refinement P Bankhead, CN Scholfield, JG McGeown, TM Curtis PloS one 7 (3), e32435, 2012 | 443 | 2012 |
Topography of cancer-associated immune cells in human solid tumors JN Kather, M Suarez-Carmona, P Charoentong, CA Weis, D Hirsch, ... Elife 7, e36967, 2018 | 286 | 2018 |
Digital pathology and image analysis in tissue biomarker research PW Hamilton, P Bankhead, Y Wang, R Hutchinson, D Kieran, DG McArt, ... Methods 70 (1), 59-73, 2014 | 241 | 2014 |
QuPath: open source software for digital pathology image analysis. Sci Rep 7: 16878 P Bankhead, MB Loughrey, JA Fernández, Y Dombrowski, DG McArt, ... | 240 | 2017 |
Translation suppression promotes stress granule formation and cell survival in response to cold shock S Hofmann, V Cherkasova, P Bankhead, B Bukau, G Stoecklin Molecular biology of the cell 23 (19), 3786-3800, 2012 | 219 | 2012 |
Dynamic oscillation of translation and stress granule formation mark the cellular response to virus infection A Ruggieri, E Dazert, P Metz, S Hofmann, JP Bergeest, J Mazur, ... Cell host & microbe 12 (1), 71-85, 2012 | 208 | 2012 |
Common limitations of image processing metrics: A picture story A Reinke, MD Tizabi, CH Sudre, M Eisenmann, T Rädsch, M Baumgartner, ... arXiv preprint arXiv:2104.05642, 2021 | 207 | 2021 |
Human Pancreatic Carcinoma-Associated Fibroblasts Promote Expression of Co-inhibitory Markers on CD4+ and CD8+ T-Cells L Gorchs, C Fernández Moro, P Bankhead, KP Kern, I Sadeak, Q Meng, ... Frontiers in immunology 10, 847, 2019 | 190 | 2019 |
Deep learning–based segmentation and quantification in experimental kidney histopathology N Bouteldja, BM Klinkhammer, RD Bülow, P Droste, SW Otten, ... Journal of the American Society of Nephrology 32 (1), 52-68, 2021 | 146 | 2021 |
Analyzing fluorescence microscopy images with ImageJ P Bankhead ImageJ 1 (195), 10-1109, 2014 | 134 | 2014 |
Dengue virus inhibition of autophagic flux and dependency of viral replication on proteasomal degradation of the autophagy receptor p62 P Metz, A Chiramel, L Chatel-Chaix, G Alvisi, P Bankhead, ... Journal of virology 89 (15), 8026-8041, 2015 | 128 | 2015 |
Integrated tumor identification and automated scoring minimizes pathologist involvement and provides new insights to key biomarkers in breast cancer P Bankhead, JA Fernández, DG McArt, DP Boyle, G Li, MB Loughrey, ... Laboratory investigation 98 (1), 15-26, 2018 | 115 | 2018 |
The RNA processing factors THRAP3 and BCLAF1 promote the DNA damage response through selective mRNA splicing and nuclear export J Vohhodina, EM Barros, AL Savage, FG Liberante, L Manti, P Bankhead, ... Nucleic acids research 45 (22), 12816-12833, 2017 | 104 | 2017 |
Validation of the systematic scoring of immunohistochemically stained tumour tissue microarrays using QuPath digital image analysis MB Loughrey, P Bankhead, HG Coleman, RS Hagan, S Craig, ... Histopathology 73 (2), 327-338, 2018 | 86 | 2018 |
QuPath: Open source software for digital pathology image analysis. Sci Rep. 2017; 7 (1): 16878 P Bankhead, MB Loughrey, JA Fernandez, Y Dombrowski, DG McArt, ... Journal for ImmunoTherapy of Cancer (JITC) preprint. The copyright holder …, 0 | 83 | |
Identifying mismatch repair‐deficient colon cancer: near‐perfect concordance between immunohistochemistry and microsatellite instability testing in a large, population‐based series MB Loughrey, J McGrath, HG Coleman, P Bankhead, P Maxwell, ... Histopathology 78 (3), 401-413, 2021 | 76 | 2021 |
QuPath: Open source software for digital pathology image analysis. Sci Rep. 2017; 7: 16878 P Bankhead, MB Loughrey, JA Fernández, Y Dombrowski, DG McArt, ... CHAPTER, 2022 | 74 | 2022 |