Ville Mustonen

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Christopher IllingworthMRC-University of Glasgow Centre for Virus ResearchVerified email at cam.ac.uk
Jonas WarringerUniversity of GothenburgVerified email at cmb.gu.se
Leopold PartsFaculty at Wellcome Sanger Institute; Senior Researcher (part-time) at University of TartuVerified email at sanger.ac.uk
Andrej FischerWellcome Trust Sanger InstituteVerified email at sanger.ac.uk
Gianni LitiIRCAN, CNRS, INSERM, Université Côte d'Azur, University of NiceVerified email at unice.fr
Francisco SalinasUniversidad Austral de ChileVerified email at uach.cl
Johannes CairnsUniversity of TurkuVerified email at utu.fi
Ignacio Vázquez-GarcíaMassachusetts General Hospital | Harvard Medical School | Broad InstituteVerified email at mgh.harvard.edu
Richard DurbinDept of Genetics, University of CambridgeVerified email at cam.ac.uk
Anne FarewellUniversity of GothenburgVerified email at cmb.gu.se
Stephan SchiffelsMax Planck Institute for the Science of Human HistoryVerified email at shh.mpg.de
Qingli GuoThe Institute of Cancer ResearchVerified email at icr.ac.uk
A. Jamie WoodUniversity of YorkVerified email at york.ac.uk
Douglas Abrahamtheoretical physics university of oxfordVerified email at physics.ox.ac.uk
Teppo HiltunenUniversity of TurkuVerified email at utu.fi
Aleksandra WalczakLaboratoire de physique théorique, École normale supérieureVerified email at lpt.ens.fr
Trevor A GrahamDirector, Centre for Evolution and Cancer, ICR, LondonVerified email at icr.ac.uk
Justin B. KinneyAssociate Professor, Simons Center for Quantitative Biology, Cold Spring Harbor LaboratoryVerified email at cshl.edu
Lutz BecksUniversity of KonstanzVerified email at uni-konstanz.de
Armita NourmohammadAssociate Professor, University of WashingtonVerified email at uw.edu

Ville Mustonen

University of Helsinki

Verified email at helsinki.fi - Homepage

Bioinformatics Computational Biology Evolution #UnivHelsinkiCS


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The repertoire of mutational signatures in human cancer LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AW Tian Ng, Y Wu, ... Nature 578 (7793), 94-101, 2020	3045	2020
Landscape of somatic mutations in 560 breast cancer whole-genome sequences S Nik-Zainal, H Davies, J Staaf, M Ramakrishna, D Glodzik, X Zou, ... Nature 534 (7605), 47-54, 2016	2362	2016
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020	2031*	2020
Somatic SF3B1 Mutation in Myelodysplasia with Ring Sideroblasts E Papaemmanuil, M Cazzola, J Boultwood, L Malcovati, P Vyas, D Bowen, ... New England Journal of Medicine 365 (15), 1384-1395, 2011	1491	2011
Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma I Varela, P Tarpey, K Raine, D Huang, CK Ong, P Stephens, H Davies, ... Nature 469 (7331), 539-542, 2011	1445	2011
The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020	1014	2020
Pathway and network analysis of cancer genomes Nature methods 12 (7), 615-621, 2015	387	2015
Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... Cell 184 (8), 2239-2254. e39, 2021	376	2021
Predicting evolution M Lässig, V Mustonen, AM Walczak Nature ecology & evolution 1 (3), 0077, 2017	323	2017
A high-definition view of functional genetic variation from natural yeast genomes A Bergström, JT Simpson, F Salinas, B Barré, L Parts, A Zia, ... Molecular biology and evolution 31 (4), 872-888, 2014	319	2014
From fitness landscapes to seascapes: non-equilibrium dynamics of selection and adaptation V Mustonen, M Lässig Trends in Genetics 25 (3), 111-119, 2009	288	2009
Fitness flux and ubiquity of adaptive evolution V Mustonen, M Lässig Proceedings of the National Academy of Sciences 107 (9), 4248, 2010	211	2010
Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data D Moradigaravand, M Palm, A Farewell, V Mustonen, J Warringer, L Parts PLoS computational biology 14 (12), e1006258, 2018	205	2018
High-definition reconstruction of clonal composition in cancer A Fischer, I Vázquez-García, CJR Illingworth, V Mustonen Cell reports 7 (5), 1740-1752, 2014	197	2014
Computational approaches to identify functional genetic variants in cancer genomes Nature methods 10 (8), 723-729, 2013	190	2013
Evolutionary population genetics of promoters: Predicting binding sites and functional phylogenies V Mustonen, M Lässig Proceedings of the National Academy of Sciences of the United States of …, 2005	154	2005
Energy-dependent fitness: A quantitative model for the evolution of yeast transcription factor binding sites V Mustonen, J Kinney, CG Callan, M Lässig Proceedings of the National Academy of Sciences 105 (34), 12376, 2008	144	2008
High-resolution mapping of complex traits with a four-parent advanced intercross yeast population FA Cubillos, L Parts, F Salinas, A Bergström, E Scovacricchi, A Zia, ... Genetics 195 (3), 1141-1155, 2013	141	2013
EMu: probabilistic inference of mutational processes and their localization in the cancer genome A Fischer, CJR Illingworth, PJ Campbell, V Mustonen Genome biology 14, 1-10, 2013	137	2013
Emergent Neutrality in Adaptive Asexual Evolution S Schiffels, G Szöllösi, V Mustonen, M Lässig Genetics, 2011	130	2011

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