| Amber 2023 DA Case, HM Aktulga, K Belfon, IY Ben-Shalom, JT Berryman, SR Brozell, ... University of California, San Francisco, 2023 | 5925 | 2023 |
| Deciphering drift time measurements from travelling wave ion mobility spectrometry-mass spectrometry studies DP Smith, TW Knapman, I Campuzano, RW Malham, JT Berryman, ... European journal of mass spectrometry 15 (2), 113-130, 2009 | 420 | 2009 |
| AMBER 2018, University of California, San Francisco, 2018 DA Case, JT Berryman, RM Betz, DS Cerutti, TE Cheatham III, TA Darden, ... There is no corresponding record for this reference, 2015 | 256 | 2015 |
| AMBER 14; University of California: San Francisco, 2014 DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... There is no corresponding record for this reference, 1-826, 2014 | 248 | 2014 |
| Competition between crystal and fibril formation in molecular mutations of amyloidogenic peptides NP Reynolds, J Adamcik, JT Berryman, S Handschin, AAH Zanjani, W Li, ... Nature communications 8 (1), 1338, 2017 | 115 | 2017 |
| AMBER 14. 2014 DA Case, V Babin, J Berryman, RM Betz, Q Cai, DS Cerutti, ... University of California, San Francisco, 2014 | 113 | 2014 |
| Considerations in experimental and theoretical collision cross-section measurements of small molecules using travelling wave ion mobility spectrometry-mass spectrometry TW Knapman, JT Berryman, I Campuzano, SA Harris, AE Ashcroft International journal of mass spectrometry 298 (1-3), 17-23, 2010 | 111 | 2010 |
| ILQINS hexapeptide, identified in lysozyme left-handed helical ribbons and nanotubes, forms right-handed helical ribbons and crystals C Lara, NP Reynolds, JT Berryman, A Xu, A Zhang, R Mezzenga Journal of the American Chemical Society 136 (12), 4732-4739, 2014 | 99 | 2014 |
| Neurotoxic amyloidogenic peptides in the proteome of SARS-COV2: potential implications for neurological symptoms in COVID-19 M Charnley, S Islam, GK Bindra, J Engwirda, J Ratcliffe, J Zhou, ... Nature communications 13 (1), 3387, 2022 | 88 | 2022 |
| Crystal nucleation mechanism in melts of short polymer chains under quiescent conditions and under shear flow M Anwar, JT Berryman, T Schilling The Journal of Chemical Physics 141 (12), 2014 | 71 | 2014 |
| Systematic examination of polymorphism in amyloid fibrils by molecular-dynamics simulation JT Berryman, SE Radford, SA Harris Biophysical Journal 100 (9), 2234-2242, 2011 | 61 | 2011 |
| Sampling rare events in nonequilibrium and nonstationary systems JT Berryman, T Schilling The Journal of chemical physics 133 (24), 2010 | 60 | 2010 |
| Thermodynamic description of polymorphism in Q-and N-rich peptide aggregates revealed by atomistic simulation JT Berryman, SE Radford, SA Harris Biophysical journal 97 (1), 1-11, 2009 | 58 | 2009 |
| AMBER 22 reference manual DA Case, RE Duke, RC Walker, NR Skrynnikov, TE Cheatham III, ... University of California, San Francisco, United States-California, 2022 | 56 | 2022 |
| Darden DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... Gohlke, H., Luo, R., Merz, KM Jr., Onufriev, A., Simmerling, C., Wang, B …, 2018 | 44* | 2018 |
| Biomolecular dynamics with machine-learned quantum-mechanical force fields trained on diverse chemical fragments OT Unke, M Stöhr, S Ganscha, T Unterthiner, H Maennel, S Kashubin, ... Science Advances 10 (14), eadn4397, 2024 | 31 | 2024 |
| The Walker L Cast, W Kun-Da, L Yuan-Ching, Y Vais | 31 | 18 |
| The early crystal nucleation process in hard spheres shows synchronised ordering and densification JT Berryman, M Anwar, S Dorosz, T Schilling The Journal of chemical physics 145 (21), 2016 | 29 | 2016 |
| AMBER 142014University of California DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... San Francisco, 0 | 26 | |
| The flexible rare event sampling harness system (freshs) K Kratzer, JT Berryman, A Taudt, J Zeman, A Arnold Computer Physics Communications 185 (7), 1875-1885, 2014 | 25 | 2014 |
Raffaele MezzengaETH ZurichVerified email at hest.ethz.ch
