| NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport N Moriel, E Senel, N Friedman, N Rajewsky, N Karaiskos, M Nitzan Nature protocols 16 (9), 4177-4200, 2021 | 91 | 2021 |
| TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics S Mages, N Moriel, I Avraham-Davidi, E Murray, J Watter, F Chen, ... Nature biotechnology 41 (10), 1465-1473, 2023 | 38 | 2023 |
| Emergence of division of labor in tissues through cell interactions and spatial cues M Adler, N Moriel, A Goeva, I Avraham-Davidi, S Mages, TS Adams, ... Cell Reports 42 (5), 2023 | 28 | 2023 |
| Integrative single cell and spatial transcriptomics of colorectal cancer reveals multicellular functional units that support tumor progression I Avraham-Davidi, S Mages, J Klughammer, N Moriel, S Imada, M Hofree, ... Biorxiv, 2022.10. 02.508492, 2022 | 14 | 2022 |
| Phase2vec: Dynamical systems embedding with a physics-informed convolutional network M Ricci, N Moriel, Z Piran, M Nitzan arXiv preprint arXiv:2212.03857, 2022 | 5 | 2022 |
| A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features J Klughammer, DL Abravanel, Å Segerstolpe, TR Blosser, Y Goltsev, ... Nature Medicine 30 (11), 3236-3249, 2024 | 2 | 2024 |
| TRENDy: Temporal Regression of Effective Non-linear Dynamics M Ricci, G Pelc, Z Piran, N Moriel, M Nitzan arXiv preprint arXiv:2412.03496, 2024 | | 2024 |
| Optimal sequencing budget allocation for trajectory reconstruction of single cells N Moriel, E Memet, M Nitzan Bioinformatics 40 (Supplement_1), i446-i452, 2024 | | 2024 |
| Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics I Avraham-Davidi, S Mages, J Klughammer, N Moriel, S Imada, M Hofree, ... bioRxiv, 2022.10. 02.508492, 2024 | | 2024 |
| Let's do the time-warp-attend: Learning topological invariants of dynamical systems N Moriel, M Ricci, M Nitzan arXiv preprint arXiv:2312.09234, 2023 | | 2023 |
| Using co-localization priors and microenvironment statistics to reconstruct tissue organization from single-cell data Y Vaknin, N Moriel, M Nitzan NeurIPS 2022 Workshop on Learning Meaningful Representations of Life, 2022 | | 2022 |
| Dynamical systems embedding with a physics-informed convolutional network M Ricci, N Moriel, Z Piran, M Nitzan International Conference on Learning Representations, 0 | | |
Mor NitzanThe Hebrew University of JerusalemVerified email at mail.huji.ac.il