Articles with public access mandates - Dominik NiopekLearn more
Not available anywhere: 6
Engineered anti-CRISPR proteins for optogenetic control of CRISPR–Cas9
F Bubeck, MD Hoffmann, Z Harteveld, S Aschenbrenner, A Bietz, ...
Nature methods 15 (11), 924-927, 2018
Mandates: Swiss National Science Foundation, German Research Foundation, Helmholtz …
Leveraging implicit knowledge in neural networks for functional dissection and engineering of proteins
J Upmeier zu Belzen, T Bürgel, S Holderbach, F Bubeck, L Adam, ...
Nature Machine Intelligence 1 (5), 225-235, 2019
Mandates: German Research Foundation, Federal Ministry of Education and Research, Germany
Optogenetic control of nuclear protein import in living cells using light‐inducible nuclear localization signals (LINuS)
P Wehler, D Niopek, R Eils, B Di Ventura
Current protocols in chemical biology 8 (2), 131-145, 2016
Mandates: Helmholtz Association
Optogenetics and CRISPR: a new relationship built to last
J Mathony, MD Hoffmann, D Niopek
Photoswitching Proteins: Methods and Protocols, 261-281, 2020
Mandates: Helmholtz Association
Transcriptomics-inferred dynamics of SARS-CoV-2 interactions with host epithelial cells
L Adam, M Stanifer, F Springer, J Mathony, M Brune, C Di Ponzio, R Eils, ...
Science Signaling 16 (804), eabl8266, 2023
Mandates: German Research Foundation, European Commission, Federal Ministry of …
Light-Inducible CRISPR labeling
MD Hoffmann, F Bubeck, D Niopek
Photoswitching Proteins: Methods and Protocols, 137-150, 2020
Mandates: Helmholtz Association
Available somewhere: 16
CRISPR/Cas9‐mediated genome engineering: an adeno‐associated viral (AAV) vector toolbox
E Senís, C Fatouros, S Große, E Wiedtke, D Niopek, AK Mueller, K Börner, ...
Biotechnology journal 9 (11), 1402-1412, 2014
Mandates: German Research Foundation
Optogenetic control of nuclear protein export
D Niopek, P Wehler, J Roensch, R Eils, B Di Ventura
Nature communications 7 (1), 10624, 2016
Mandates: Helmholtz Association
Cell-specific CRISPR–Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins
MD Hoffmann, S Aschenbrenner, S Grosse, K Rapti, C Domenger, ...
Nucleic acids research 47 (13), e75-e75, 2019
Mandates: German Research Foundation, Helmholtz Association, European Commission …
Coupling Cas9 to artificial inhibitory domains enhances CRISPR-Cas9 target specificity
S Aschenbrenner, SM Kallenberger, MD Hoffmann, A Huck, R Eils, ...
Science advances 6 (6), eaay0187, 2020
Mandates: German Research Foundation, Helmholtz Association, Federal Ministry of …
AAV vector-mediated in vivo reprogramming into pluripotency
E Senís, L Mosteiro, S Wilkening, E Wiedtke, A Nowrouzi, S Afzal, ...
Nature Communications 9 (1), 2651, 2018
Mandates: German Research Foundation, Helmholtz Association, European Commission …
A robust and all-inclusive pipeline for shuffling of adeno-associated viruses
AK Herrmann, C Bender, E Kienle, S Grosse, J El Andari, J Botta, ...
ACS synthetic biology 8 (1), 194-206, 2018
Mandates: German Research Foundation, European Commission, Federal Ministry of …
Optogenetic control of Neisseria meningitidis Cas9 genome editing using an engineered, light-switchable anti-CRISPR protein
MD Hoffmann, J Mathony, J Upmeier zu Belzen, Z Harteveld, ...
Nucleic acids research 49 (5), e29-e29, 2021
Mandates: Swiss National Science Foundation, German Research Foundation, Helmholtz …
Controlling cells with light and LOV
MD Hoffmann, F Bubeck, R Eils, D Niopek
Advanced Biosystems 2 (9), 1800098, 2018
Mandates: German Research Foundation, Helmholtz Association, Federal Ministry of …
Enlightening allostery: designing switchable proteins by photoreceptor fusion
J Mathony, D Niopek
Advanced Biology 5 (5), 2000181, 2021
Mandates: German Research Foundation
Computational design of anti-CRISPR proteins with improved inhibition potency
J Mathony, Z Harteveld, C Schmelas, J Upmeier zu Belzen, ...
Nature chemical biology 16 (7), 725-730, 2020
Mandates: Swiss National Science Foundation, National Natural Science Foundation of …
A hepatic GAbp-AMPK axis links inflammatory signaling to systemic vascular damage
K Niopek, BE Üstünel, S Seitz, M Sakurai, A Zota, F Mattijssen, X Wang, ...
Cell reports 20 (6), 1422-1434, 2017
Mandates: German Research Foundation, Federal Ministry of Education and Research, Germany
A deep mutational scanning platform to characterize the fitness landscape of anti-CRISPR proteins
T Stadelmann, D Heid, M Jendrusch, J Mathony, S Aschenbrenner, ...
Nucleic acids research 52 (22), e103-e103, 2024
Mandates: European Commission
Dissecting the Determinants of Domain Insertion Tolerance and Allostery in Proteins
J Mathony, S Aschenbrenner, P Becker, D Niopek
Advanced Science 10 (28), 2303496, 2023
Mandates: German Research Foundation, European Commission
Dynamics of SARS-CoV-2 host cell interactions inferred from transcriptome analyses
L Adam, M Stanifer, F Springer, J Mathony, C Di Ponzio, R Eils, S Boulant, ...
bioRxiv, 2021.07. 04.450986, 2021
Mandates: German Research Foundation, Federal Ministry of Education and Research, Germany
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