| Nucleotide Transformer: building and evaluating robust foundation models for human genomics H Dalla-Torre, L Gonzalez, J Mendoza-Revilla, N Lopez Carranza, ... Nature Methods, 1-11, 2024 | 226 | 2024 |
| Adapt: Awesome domain adaptation python toolbox A de Mathelin, M Atiq, G Richard, A de la Concha, M Yachouti, ... arXiv preprint arXiv:2107.03049, 2021 | 66 | 2021 |
| Adversarial weighting for domain adaptation in regression A De Mathelin, G Richard, F Deheeger, M Mougeot, N Vayatis 2021 IEEE 33rd International Conference on Tools with Artificial …, 2021 | 50 | 2021 |
| Multi-objective quality diversity optimization T Pierrot, G Richard, K Beguir, A Cully Proceedings of the Genetic and Evolutionary Computation Conference, 139-147, 2022 | 43 | 2022 |
| Unsupervised multi-source domain adaptation for regression G Richard, A Mathelin, G Hébrail, M Mougeot, N Vayatis Machine Learning and Knowledge Discovery in Databases: European Conference …, 2021 | 28 | 2021 |
| A foundational large language model for edible plant genomes J Mendoza-Revilla, E Trop, L Gonzalez, M Roller, H Dalla-Torre, ... Communications Biology 7 (1), 835, 2024 | 24 | 2024 |
| Qdax: A library for quality-diversity and population-based algorithms with hardware acceleration F Chalumeau, B Lim, R Boige, M Allard, L Grillotti, M Flageat, V Macé, ... Journal of Machine Learning Research 25 (108), 1-16, 2024 | 21 | 2024 |
| Autoencoder-based time series clustering with energy applications G Richard, B Grossin, G Germaine, G Hébrail, A de Moliner Conférence sur l'Apprentissage automatique (CAp) 2018, 2018 | 15 | 2018 |
| Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana H Alexander, J Wittenberg, T Van, D Lee, C Cayla, A Kilian, G Richard, ... Molecular Genetics and Genomics 274 (1), 30, 2005 | 15 | 2005 |
| The quality-diversity transformer: Generating behavior-conditioned trajectories with decision transformers V Macé, R Boige, F Chalumeau, T Pierrot, G Richard, N Perrin-Gilbert Proceedings of the Genetic and Evolutionary Computation Conference, 1221-1229, 2023 | 11 | 2023 |
| Chatnt: A multimodal conversational agent for dna, rna and protein tasks G Richard, BP de Almeida, H Dalla-Torre, C Blum, L Hexemer, P Pandey, ... bioRxiv, 2024.04. 30.591835, 2024 | 10 | 2024 |
| SegmentNT: annotating the genome at single-nucleotide resolution with DNA foundation models BP de Almeida, H Dalla-Torre, G Richard, C Blum, L Hexemer, M Gélard, ... bioRxiv, 2024.03. 14.584712, 2024 | 10 | 2024 |
| Chatnt: A multimodal conversational agent for dna, rna and protein tasks. bioRxiv G Richard, BP de Almeida, H Dalla-Torre, C Blum, L Hexemer, P Pandey, ... | 8 | 2024 |
| Unsupervised domain adaptation for constraining star formation histories S Gilda, A de Mathelin, S Bellstedt, G Richard Astronomy 3 (3), 189-207, 2024 | 5 | 2024 |
| PASTA: Pretrained action-state transformer agents R Boige, Y Flet-Berliac, A Flajolet, G Richard, T Pierrot arXiv preprint arXiv:2307.10936, 2023 | 5 | 2023 |
| Gradient-informed quality diversity for the illumination of discrete spaces R Boige, G Richard, J Dona, T Pierrot, A Cully Proceedings of the Genetic and Evolutionary Computation Conference, 119-128, 2023 | 5 | 2023 |
| Dt-ds: Can intrusion detection with decision tree ensembles J Mehta, G Richard, L Lugosch, D Yu, BH Meyer ACM Transactions on Cyber-Physical Systems 7 (1), 1-27, 2023 | 5 | 2023 |
| DenseNets for Time Series Classification: towards automation of time series pre-processing with CNNs G Richard, G Hébrail, M Mougeot, N Vayatis MiLeTS19@SIGKDD 25th ACM SIGKDD International Conference on Knowledge …, 2019 | 5 | 2019 |
| The nucleotide transformer: building and evaluating robust foundation models for Human genomics. 2023; bioRxiv doi: 15 January 2023, preprint: not peer reviewedhttps H Dalla-Torre, L Gonzalez, JM Revilla, NL Carranza, AH Grzywaczewski, ... doi. org/10.1101/2023.01 11, 0 | 5 | |
| Multi-modal transfer learning between biological foundation models JJ Garau-Luis, P Bordes, L Gonzalez, M Roller, B de Almeida, C Blum, ... Advances in Neural Information Processing Systems 37, 78431-78450, 2025 | 3 | 2025 |
