Articles with public access mandates - Basak EraslanLearn more
Available somewhere: 12
A deep proteome and transcriptome abundance atlas of 29 healthy human tissues
D Wang, B Eraslan, T Wieland, B Hallström, T Hopf, DP Zolg, J Zecha, ...
Molecular systems biology 15 (2), e8503, 2019
Mandates: German Research Foundation, Knut and Alice Wallenberg Foundation, European …
B cell genomics behind cross-neutralization of SARS-CoV-2 variants and SARS-CoV
JF Scheid, CO Barnes, B Eraslan, A Hudak, JR Keeffe, LA Cosimi, ...
Cell 184 (12), 3205-3221. e24, 2021
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Quantification and discovery of sequence determinants of protein‐per‐mRNA amount in 29 human tissues
B Eraslan, D Wang, M Gusic, H Prokisch, BM Hallström, M Uhlén, ...
Molecular systems biology 15 (2), e8513, 2019
Mandates: German Research Foundation, European Commission
Scalable genetic screening for regulatory circuits using compressed Perturb-seq
D Yao, L Binan, J Bezney, B Simonton, J Freedman, CJ Frangieh, K Dey, ...
Nature biotechnology 42 (8), 1282-1295, 2024
Mandates: Howard Hughes Medical Institute
Learning causal representations of single cells via sparse mechanism shift modeling
R Lopez, N Tagasovska, S Ra, K Cho, J Pritchard, A Regev
Conference on Causal Learning and Reasoning, 662-691, 2023
Mandates: US National Institutes of Health
Large-scale differentiable causal discovery of factor graphs
R Lopez, JC Hütter, J Pritchard, A Regev
Advances in Neural Information Processing Systems 35, 19290-19303, 2022
Mandates: US National Institutes of Health
HLA-II immunopeptidome profiling and deep learning reveal features of antigenicity to inform antigen discovery
M Stražar, J Park, JG Abelin, HB Taylor, TK Pedersen, DR Plichta, ...
Immunity 56 (7), 1681-1698. e13, 2023
Mandates: US National Institutes of Health
Remodeling of colon plasma cell repertoire within ulcerative colitis patients
JF Scheid, B Eraslan, A Hudak, EM Brown, D Sergio, TM Delorey, ...
Journal of Experimental Medicine 220 (4), e20220538, 2023
Mandates: US National Institutes of Health
Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq
K Geiger-Schuller, B Eraslan, O Kuksenko, K K Dey, K Jagadeesh, ...
https://doi.org/10.1101/2023.01.23.525198, 2023
Mandates: US National Institutes of Health
Compressed Perturb-seq: highly efficient screens for regulatory circuits using random composite perturbations
D Yao, L Binan, J Bezney, B Simonton, J Freedman, CJ Frangieh, K Dey, ...
BioRxiv, 2023
Mandates: US National Science Foundation, US National Institutes of Health, Howard …
Functional analyses and single cell immunoprofiling uncover sex-specific differences in SARS-CoV2 immune memory development
B Eraslan, E Brown, M Benson, L Amir-Zilberstein, SM Park, B Tusi, ...
Research Square, 2022
Mandates: US National Institutes of Health
Remodeling of human colon plasma cell repertoire in ulcerative colitis
JF Scheid, B Eraslan, A Hudak, E Brown, D Sergio, T Delorey, D Phillips, ...
bioRxiv, 2022.02. 14.480403, 2022
Mandates: US National Institutes of Health
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