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Basak Eraslan
Basak Eraslan
Postdoctoral Researcher
Verified email at gene.com
Title
Cited by
Cited by
Year
A deep proteome and transcriptome abundance atlas of 29 healthy human tissues
D Wang, B Eraslan, T Wieland, B Hallström, T Hopf, DP Zolg, J Zecha, ...
Molecular systems biology 15 (2), e8503, 2019
6882019
B cell genomics behind cross-neutralization of SARS-CoV-2 variants and SARS-CoV
JF Scheid, CO Barnes, B Eraslan, A Hudak, JR Keeffe, LA Cosimi, ...
Cell 184 (12), 3205-3221. e24, 2021
952021
Quantification and discovery of sequence determinants of protein‐per‐mRNA amount in 29 human tissues
B Eraslan, D Wang, M Gusic, H Prokisch, BM Hallström, M Uhlén, ...
Molecular systems biology 15 (2), e8513, 2019
802019
Scalable genetic screening for regulatory circuits using compressed Perturb-seq
D Yao, L Binan, J Bezney, B Simonton, J Freedman, CJ Frangieh, K Dey, ...
Nature biotechnology 42 (8), 1282-1295, 2024
392024
Learning causal representations of single cells via sparse mechanism shift modeling
R Lopez, N Tagasovska, S Ra, K Cho, J Pritchard, A Regev
Conference on Causal Learning and Reasoning, 662-691, 2023
382023
Large-scale differentiable causal discovery of factor graphs
R Lopez, JC Hütter, J Pritchard, A Regev
Advances in Neural Information Processing Systems 35, 19290-19303, 2022
372022
An auction theory based algorithm for throughput maximizing scheduling in centralized cognitive radio networks
B Eraslan, D Gozupek, F Alagoz
IEEE Communications letters 15 (7), 734-736, 2011
342011
Throughput satisfaction-based scheduling for cognitive radio networks
D Gozupek, B Eraslan, F Alagoz
IEEE transactions on vehicular technology 61 (9), 4079-4094, 2012
202012
HLA-II immunopeptidome profiling and deep learning reveal features of antigenicity to inform antigen discovery
M Stražar, J Park, JG Abelin, HB Taylor, TK Pedersen, DR Plichta, ...
Immunity 56 (7), 1681-1698. e13, 2023
192023
Hallströ m
D Wang, B Eraslan, T Wieland
B., Hopf, T., Zolg, DP, Zecha, J., Asplund, A., Li, LH, Meng, C., et al, 2019
162019
Remodeling of colon plasma cell repertoire within ulcerative colitis patients
JF Scheid, B Eraslan, A Hudak, EM Brown, D Sergio, TM Delorey, ...
Journal of Experimental Medicine 220 (4), e20220538, 2023
122023
Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq
K Geiger-Schuller, B Eraslan, O Kuksenko, K K Dey, K Jagadeesh, ...
https://doi.org/10.1101/2023.01.23.525198, 2023
122023
.(2019) A deep proteome and transcriptome abundance atlas of 29 healthy human tissues
D Wang, B Eraslan, T Wieland, B Hallström, T Hopf, DP Zolg
Mol. Syst. Biol 15, e8503, 0
12
Compressed Perturb-seq: highly efficient screens for regulatory circuits using random composite perturbations
D Yao, L Binan, J Bezney, B Simonton, J Freedman, CJ Frangieh, K Dey, ...
BioRxiv, 2023
112023
Functional analyses and single cell immunoprofiling uncover sex-specific differences in SARS-CoV2 immune memory development
B Eraslan, E Brown, M Benson, L Amir-Zilberstein, SM Park, B Tusi, ...
Research Square, 2022
12022
Heuristic algorithms for scheduling in centralized cognitive radio networks
B Eraslan
MS Thesis, Computer Engineering, Bogazici University, 2011
12011
Cross-neutralizing sars-cov2 antibodies
R Xavier, J Scheid, C Barnes, P Bjorkman, B Eraslan
US Patent App. 18/270,131, 2024
2024
Compressed Perturb-seq: highly efficient screens for regulatory circuits using random composite perturbations
BC Douglas Yao, Loic Binan, Jon Bezney, Brooke Simonton, Jahanara Freedman ...
https://www.biorxiv.org/content/10.1101/2023.01.23.525200v1, 2023
2023
Remodeling of human colon plasma cell repertoire in ulcerative colitis
JF Scheid, B Eraslan, A Hudak, E Brown, D Sergio, T Delorey, D Phillips, ...
bioRxiv, 2022.02. 14.480403, 2022
2022
Structural insights into antibody-mediated neutralization of SARS-CoV-2
C Barnes, JF Scheid, B Eraslan, A Hudak, F Muecksch, Y Weisblum, ...
GLYCOBIOLOGY 31 (12), 1696-1697, 2021
2021
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Articles 1–20