| Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis ME Zwick*, SJ Joseph*, X Didelot, PE Chen, KA Bishop-Lilly, AC Stewart, ... Genome research 22 (8), 1512-1524, 2012 | 190 | 2012 |
| Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure SJ Joseph, X Didelot, J Rothschild, HJC de Vries, SA Morré, TD Read, ... Molecular biology and evolution 29 (12), 3933-3946, 2012 | 118 | 2012 |
| Comparative analysis of Chlamydia psittaci genomes reveals the recent emergence of a pathogenic lineage with a broad host range TD Read*, SJ Joseph*, X Didelot, B Liang, L Patel, D Dean MBio 4 (2), e00604-12, 2013 | 111 | 2013 |
| Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L2) and D Lineages N Somboonna, R Wan, DM Ojcius, MA Pettengill, SJ Joseph, A Chang, ... MBio 2 (3), 10.1128/mbio. 00045-11, 2011 | 109 | 2011 |
| Draft sequencing and assembly of the genome of the world’s largest fish, the whale shark: Rhincodon typus Smith 1828 TD Read, RA Petit, SJ Joseph, MT Alam, MR Weil, M Ahmad, R Bhimani, ... BMC genomics 18, 1-10, 2017 | 103 | 2017 |
| Interplay of recombination and selection in the genomes of Chlamydia trachomatis SJ Joseph, X Didelot, K Gandhi, D Dean, TD Read Biology direct 6, 1-16, 2011 | 100 | 2011 |
| Characterization of Aeromonas hydrophila wound pathotypes by comparative genomic and functional analyses of virulence genes CJ Grim, EV Kozlova, J Sha, EC Fitts, CJ van Lier, ML Kirtley, SJ Joseph, ... MBio 4 (2), 2013 | 94 | 2013 |
| The Alveolate Perkinsus marinus: Biological Insights from EST Gene Discovery SJ Joseph, JA Fernández-Robledo, MJ Gardner, NM El-Sayed, CH Kuo, ... BMC genomics 11, 1-21, 2010 | 89 | 2010 |
| Population structure of Neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance MN Ezewudo, SJ Joseph, S Castillo-Ramirez, D Dean, C Del Rio, ... PeerJ 3, e806, 2015 | 83 | 2015 |
| Functional genomic characterization of virulence factors from necrotizing fasciitis-causing strains of Aeromonas hydrophila CJ Grim, EV Kozlova, D Ponnusamy, EC Fitts, J Sha, ML Kirtley, ... Applied and environmental microbiology 80 (14), 4162-4183, 2014 | 83 | 2014 |
| Meningococcal carriage following a vaccination campaign with MenB-4C and MenB-FHbp in response to a university serogroup B meningococcal disease outbreak—Oregon, 2015–2016 LA McNamara, JD Thomas, J MacNeil, HY Chang, M Day, E Fisher, ... The Journal of Infectious Diseases 216 (9), 1130-1140, 2017 | 71 | 2017 |
| Oral microbiome in HIV-associated periodontitis M Noguera-Julian, Y Guillén, J Peterson, D Reznik, EV Harris, SJ Joseph, ... Medicine 96 (12), e5821, 2017 | 68 | 2017 |
| Meningococcal disease among college-aged young adults: 2014–2016 SA Mbaeyi, SJ Joseph, A Blain, X Wang, S Hariri, JR MacNeil Pediatrics 143 (1), 2019 | 53 | 2019 |
| Bacterial population genomics and infectious disease diagnostics SJ Joseph, TD Read Trends in biotechnology 28 (12), 611-618, 2010 | 52 | 2010 |
| Chlamydiaceae Genomics Reveals Interspecies Admixture and the Recent Evolution of Chlamydia abortus Infecting Lower Mammalian Species and Humans SJ Joseph, H Marti, X Didelot, S Castillo-Ramirez, TD Read, D Dean Genome biology and evolution 7 (11), 3070-3084, 2015 | 50 | 2015 |
| Tetracycline Selective Pressure and Homologous Recombination Shape the Evolution of Chlamydia suis: A Recently Identified Zoonotic Pathogen SJ Joseph, H Marti, X Didelot, TD Read, D Dean Genome biology and evolution 8 (8), 2613-2623, 2016 | 47 | 2016 |
| Effect of diet supplementation on the expression of bovine genes associated with fatty acid synthesis and metabolism SJ Joseph, KR Robbins, E Pavan, SL Pratt, SK Duckett, R Rekaya Bioinformatics and biology insights 4, BBI. S4168, 2010 | 40 | 2010 |
| Genetic similarity of gonococcal homologs to meningococcal outer membrane proteins of serogroup B vaccine H Marjuki, N Topaz, SJ Joseph, KM Gernert, EN Kersh, ... MBio 10 (5), 10.1128/mbio. 01668-19, 2019 | 39 | 2019 |
| Dynamics of genome change among Legionella species SJ Joseph, D Cox, B Wolff, SS Morrison, NA Kozak-Muiznieks, M Frace, ... Scientific reports 6 (1), 33442, 2016 | 38 | 2016 |
| Tet(C) Gene Transfer between Chlamydia suis Strains Occurs by Homologous Recombination after Co-infection: Implications for Spread of Tetracycline-Resistance among … H Marti, H Kim, SJ Joseph, S Dojiri, TD Read, D Dean Frontiers in microbiology 8, 156, 2017 | 35 | 2017 |
Timothy D ReadEmory UniversityVerified email at emory.edu