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Ofer Kimchi
Ofer Kimchi
Verified email at princeton.edu
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Cited by
Cited by
Year
Sequence analysis of SARS-CoV-2 genome reveals features important for vaccine design
J Kames, DD Holcomb, O Kimchi, M DiCuccio, N Hamasaki-Katagiri, ...
Scientific Reports 10 (1), 15643, 2020
612020
Paracrine regulation of glucagon secretion: the β/α/δ model
M Watts, J Ha, O Kimchi, A Sherman
American Journal of Physiology-Endocrinology and Metabolism 310 (8), E597-E611, 2016
542016
Ion channels can be allosterically regulated by membrane domains near a de-mixing critical point
O Kimchi, SL Veatch, BB Machta
Journal of General Physiology 150 (12), 1769-1777, 2018
28*2018
Uncovering the mechanism for aggregation in repeat expanded RNA reveals a reentrant transition
O Kimchi, EM King, MP Brenner
Nature Communications 14 (1), 332, 2023
162023
A polymer physics framework for the entropy of arbitrary pseudoknots
O Kimchi, T Cragnolini, MP Brenner, LJ Colwell
Biophysical journal 117 (3), 520-532, 2019
162019
Self-assembly–based posttranslational protein oscillators
O Kimchi, CP Goodrich, A Courbet, AI Curatolo, NB Woodall, D Baker, ...
Science Advances 6 (51), eabc1939, 2020
112020
Lytic and temperate phage naturally coexist in a dynamic population model
O Kimchi, Y Meir, NS Wingreen
The ISME Journal 18 (1), wrae093, 2024
42024
A computational toolbox for the assembly yield of complex and heterogeneous structures
AI Curatolo, O Kimchi, CP Goodrich, RK Krueger, MP Brenner
Nature Communications 14 (1), 8328, 2023
4*2023
RNA structure modulates Cas13 activity and enables mismatch detection
O Kimchi, BB Larsen, ORS Dunkley, AJW Te Velthuis, C Myhrvold
Biophysical Journal 123 (3), 291a-292a, 2024
32024
Measuring intramolecular connectivity in long RNA molecules using two-dimensional DNA patch-probe arrays
TK Chiang, O Kimchi, HK Dhaliwal, DA Villarreal, FF Vasquez, ...
bioRxiv, 2023.03. 12.532302, 2023
12023
Bacterial defense and phage counterdefense lead to coexistence in a modeled ecosystem
O Kimchi, Y Meir, NS Wingreen
Proceedings of the National Academy of Sciences 121 (44), e2414229121, 2024
2024
The Specificity and Kinetics of RNA-RNA Interactions
O Kimchi
2024 AIChE Annual Meeting, 2024
2024
Phage and bacteria: Competition and coexistence
O Kimchi
APS March Meeting Abstracts 2024, Q41. 001, 2024
2024
PB1316 Impact of Synonymous Gene Recoding on ADAMTS13
B Lin, R Amarasinghe, U Katneni, K Jankowska, N Hamasaki-Katagiri, ...
Research and Practice in Thrombosis and Haemostasis 7, 2023
2023
A reentrant transition in RNA aggregation
O Kimchi, E King, A Pyo, N Wingreen, M Brenner
APS March Meeting Abstracts 2023, Q25. 008, 2023
2023
Nucleic Acid Structure Prediction Including Pseudoknots Through Direct Enumeration of States: A User’s Guide to the LandscapeFold Algorithm
O Kimchi, MP Brenner, LJ Colwell
RNA Structure Prediction, 49-77, 2022
2022
Method of Determining Secondary Structure of a Nucleic Acid
RF Garmann, TK Chiang, VN Manoharan, O Kimchi, MP Brenner
US Patent App. 17/482,765, 2022
2022
RNA Hybridization and Protein Multimerization In and Out of Equilibrium
O Kimchi
2021
Secondary structure of very large RNAs via high-throughput oligonucleotide-binding microarrays
O Kimchi, R Garmann, T Chiang, M Engel, V Manoharan, M Brenner
APS March Meeting Abstracts 2021, E03. 006, 2021
2021
A computational toolbox for heterogeneous self-assembly
A Curatolo, C Goodrich, O Kimchi, M Brenner
APS March Meeting Abstracts 2021, F07. 002, 2021
2021
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Articles 1–20