| Copy number variation of multiple genes at Rhg1 mediates nematode resistance in soybean DE Cook, TG Lee, X Guo, S Melito, K Wang, AM Bayless, J Wang, ... science 338 (6111), 1206-1209, 2012 | 697 | 2012 |
| Understanding Plant Immunity as a Surveillance System to Detect Invasion DE Cook, CH Mesarich, BPHJ Thomma Annual Review of Phytopathology 53 (1), 541, 2015 | 594 | 2015 |
| Distinct Copy Number, Coding Sequence, and Locus Methylation Patterns Underlie Rhg1-Mediated Soybean Resistance to Soybean Cyst Nematode DE Cook, AM Bayless, K Wang, X Guo, Q Song, J Jiang, AF Bent Plant physiology 165 (2), 630-647, 2014 | 155 | 2014 |
| Metabolomics of tomato xylem sap during bacterial wilt reveals Ralstonia solanacearum produces abundant putrescine, a metabolite that accelerates wilt disease TM Lowe‐Power, CG Hendrich, E von Roepenack‐Lahaye, B Li, D Wu, ... Environmental microbiology 20 (4), 1330-1349, 2018 | 145 | 2018 |
| Effector gene reshuffling involves dispensable mini-chromosomes in the wheat blast fungus Z Peng, E Oliveira-Garcia, G Lin, Y Hu, M Dalby, P Migeon, H Tang, ... PLoS genetics 15 (9), e1008272, 2019 | 128 | 2019 |
| Mind the gap; seven reasons to close fragmented genome assemblies BPHJ Thomma, MF Seidl, X Shi-Kunne, DE Cook, MD Bolton, ... Fungal Genetics and Biology 90, 24-30, 2016 | 122 | 2016 |
| A nematode demographics assay in transgenic roots reveals no significant impacts of the Rhg1locus LRR-Kinase on soybean cyst nematode resistance S Melito, AL Heuberger, D Cook, BW Diers, AE MacGuidwin, AF Bent BMC plant biology 10, 1-14, 2010 | 113 | 2010 |
| Histone modification dynamics at H3K27 are associated with altered transcription of in planta induced genes in Magnaporthe oryzae W Zhang, J Huang, DE Cook PLoS genetics 17 (2), e1009376, 2021 | 68 | 2021 |
| Long-read annotation: automated eukaryotic genome annotation based on long-read cDNA sequencing DE Cook, JE Valle-Inclan, A Pajoro, H Rovenich, BPHJ Thomma, L Faino Plant physiology 179 (1), 38-54, 2019 | 65 | 2019 |
| Plant–necrotroph co-transcriptome networks illuminate a metabolic battlefield W Zhang, JA Corwin, DH Copeland, J Feusier, R Eshbaugh, DE Cook, ... elife 8, e44279, 2019 | 62 | 2019 |
| CRISPR guides induce gene silencing in plants in the absence of Cas VK Sharma, S Marla, W Zheng, D Mishra, J Huang, W Zhang, GP Morris, ... Genome Biology 23, 1-24, 2022 | 49 | 2022 |
| Chromatin biology impacts adaptive evolution of filamentous plant pathogens MF Seidl, DE Cook, BPHJ Thomma PLoS pathogens 12 (11), e1005920, 2016 | 39 | 2016 |
| The contribution of DNA repair pathways to genome editing and evolution in filamentous pathogens J Huang, DE Cook FEMS Microbiology Reviews 46 (6), fuac035, 2022 | 36 | 2022 |
| A unique chromatin profile defines adaptive genomic regions in a fungal plant pathogen DE Cook, HM Kramer, DE Torres, MF Seidl, BPHJ Thomma Elife 9, e62208, 2020 | 35 | 2020 |
| Repetitive Elements Contribute to the Diversity and Evolution of Centromeres in the Fungal Genus Verticillium MF Seidl, HM Kramer, DE Cook, GL Fiorin, GCM van Den Berg, L Faino, ... MBio 11 (5), 10.1128/mbio. 01714-20, 2020 | 34 | 2020 |
| CRISPR-Cas12a induced DNA double-strand breaks are repaired by multiple pathways with different mutation profiles in Magnaporthe oryzae J Huang, D Rowe, P Subedi, W Zhang, T Suelter, B Valent, DE Cook Nature Communications 13 (1), 7168, 2022 | 29 | 2022 |
| Rhg1 mediated resistance to soybean cyst nematode A Bent, M Hudson, B Diers, S Melito, D Cook, T Hughes, A Bayless, ... US Patent 10,995,342, 2021 | 27 | 2021 |
| Rapid mini‐chromosome divergence among fungal isolates causing wheat blast outbreaks in Bangladesh and Zambia S Liu, G Lin, SR Ramachandran, LC Daza, G Cruppe, B Tembo, PK Singh, ... New Phytologist 241 (3), 1266-1276, 2024 | 17 | 2024 |
| Local Rather than Global H3K27me3 Dynamics Are Associated with Differential Gene Expression in Verticillium dahliae HM Kramer, MF Seidl, BPHJ Thomma, DE Cook mBio 13 (1), https://doi.org/10.1128/mbio.03566-21, 2022 | 17 | 2022 |
| Inferring functional communities from partially observed biological networks exploiting geometric topology and side information J Sia, W Zhang, E Jonckheere, D Cook, P Bogdan Scientific Reports 12 (1), 10883, 2022 | 13 | 2022 |
Bart ThommaProfessor of Evolutionary Microbiology, Universität zu KölnVerified email at uni-koeln.de