Articles with public access mandates - Gene W. TysonLearn more
Not available anywhere: 5
Pregnant women who develop preeclampsia have lower abundance of the butyrate-producer Coprococcus in their gut microbiota
F Altemani, HL Barrett, L Gomez-Arango, P Josh, HD McIntyre, ...
Pregnancy hypertension 23, 211-219, 2021
Mandates: National Health and Medical Research Council, Australia
Comparison of microbial communities across sections of a corroding sewer pipe and the effects of wastewater flooding
BI Cayford, G Jiang, J Keller, G Tyson, PL Bond
Biofouling 33 (9), 780-792, 2017
Mandates: Australian Research Council
Characterization of a highly efficient antibiotic-degrading metallo-β-lactamase obtained from an uncultured member of a permafrost community
MM Pedroso, C Selleck, C Enculescu, JR Harmer, N Mitić, WR Craig, ...
Metallomics 9 (8), 1157-1168, 2017
Mandates: US National Science Foundation, Australian Research Council, National Health …
Accelerating bauxite residue remediation with microbial biotechnology
TC Santini, K Warren, M Raudsepp, N Carter, D Hamley, C McCosker, ...
Light Metals 2019, 69-77, 2019
Mandates: Australian Research Council
The effect of bituminous coal on methanogenic mixed cultures and pure cultures of Methanococcus and Methanosarcina
MJ Raudsepp, EJ Gagen, SD Golding, GW Tyson, G Southam
Fuel 205, 60-70, 2017
Mandates: Natural Sciences and Engineering Research Council of Canada
Available somewhere: 107
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
DH Parks, M Imelfort, CT Skennerton, P Hugenholtz, GW Tyson
Genome research 25 (7), 1043-1055, 2015
Mandates: Australian Research Council, Natural Sciences and Engineering Research …
STAMP: statistical analysis of taxonomic and functional profiles
DH Parks, GW Tyson, P Hugenholtz, RG Beiko
Bioinformatics 30 (21), 3123-3124, 2014
Mandates: Australian Research Council
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725-731, 2017
Mandates: US National Science Foundation, US Department of Energy, US National …
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
DH Parks, C Rinke, M Chuvochina, PA Chaumeil, BJ Woodcroft, ...
Nature microbiology 2 (11), 1533-1542, 2017
Mandates: US Department of Energy, Australian Research Council
Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
M Albertsen, P Hugenholtz, A Skarshewski, KL Nielsen, GW Tyson, ...
Nature biotechnology 31 (6), 533-538, 2013
Mandates: Australian Research Council
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
MF Haroon, S Hu, Y Shi, M Imelfort, J Keller, P Hugenholtz, Z Yuan, ...
Nature 500 (7464), 567-570, 2013
Mandates: Australian Research Council
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
PN Evans, DH Parks, GL Chadwick, SJ Robbins, VJ Orphan, SD Golding, ...
Science 350 (6259), 434-438, 2015
Mandates: US Department of Energy, Australian Research Council, Natural Sciences and …
Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota
I Vanwonterghem, PN Evans, DH Parks, PD Jensen, BJ Woodcroft, ...
Nature microbiology 1 (12), 1-9, 2016
Mandates: US Department of Energy, Australian Research Council
An evolving view of methane metabolism in the Archaea
PN Evans, JA Boyd, AO Leu, BJ Woodcroft, DH Parks, P Hugenholtz, ...
Nature Reviews Microbiology 17 (4), 219-232, 2019
Mandates: US Department of Energy, Australian Research Council
Host-linked soil viral ecology along a permafrost thaw gradient
JB Emerson, S Roux, JR Brum, B Bolduc, BJ Woodcroft, HB Jang, ...
Nature microbiology 3 (8), 870-880, 2018
Mandates: US National Science Foundation, US Department of Energy, Gordon and Betty …
Methane dynamics regulated by microbial community response to permafrost thaw
CK McCalley, BJ Woodcroft, SB Hodgkins, RA Wehr, EH Kim, R Mondav, ...
Nature 514 (7523), 478-481, 2014
Mandates: US Department of Energy
CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning
A Chklovski, DH Parks, BJ Woodcroft, GW Tyson
Nature Methods 20 (8), 1203-1212, 2023
Mandates: US National Science Foundation, Australian Research Council
Genome-centric view of carbon processing in thawing permafrost
BJ Woodcroft, CM Singleton, JA Boyd, PN Evans, JB Emerson, ...
Nature 560 (7716), 49-54, 2018
Mandates: US Department of Energy, Australian Research Council
Deterministic processes guide long-term synchronised population dynamics in replicate anaerobic digesters
I Vanwonterghem, PD Jensen, PG Dennis, P Hugenholtz, K Rabaey, ...
The ISME journal 8 (10), 2015-2028, 2014
Mandates: European Commission
A methanotrophic archaeon couples anaerobic oxidation of methane to Fe (III) reduction
C Cai, AO Leu, GJ Xie, J Guo, Y Feng, JX Zhao, GW Tyson, Z Yuan, S Hu
The ISME journal 12 (8), 1929-1939, 2018
Mandates: US Department of Energy, Australian Research Council
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