Articles with public access mandates - Eric DeutschLearn more
Not available anywhere: 3
Review
Meeting New Challenges: The 2014 HUPO‐PSI/COSMOS Workshop: 13–15 April 2014, Frankfurt, Germany
S Orchard, JP Albar, PA Binz, C Kettner, AR Jones, RM Salek, ...
Proteomics 14 (21-22), 2363-2368, 2014
Mandates: UK Biotechnology and Biological Sciences Research Council
Review
Trans-proteomic pipeline for the identification, validation, and quantification of proteins
EW Deutsch, L Mendoza, DD Shteynberg, Z Sun, MH Hoopmann, ...
Mandates: US National Institutes of Health
Review
Data Formats of the Proteomics Standards Initiative
JA Vizcaíno, S Perkins, AR Jones, EW Deutsch
Mandates: US National Institutes of Health, UK Biotechnology and Biological Sciences …
Available somewhere: 156
Review
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1
DJ Klionsky, AK Abdel-Aziz, S Abdelfatah, M Abdellatif, A Abdoli, S Abel, ...
autophagy 17 (1), 1-382, 2021
Mandates: Swiss National Science Foundation, US National Institutes of Health, US …
Review
A cross-platform toolkit for mass spectrometry and proteomics
MC Chambers, B Maclean, R Burke, D Amodei, DL Ruderman, ...
Nature biotechnology 30 (10), 918-920, 2012
Mandates: US National Institutes of Health
Review
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
JA Vizcaíno, EW Deutsch, R Wang, A Csordas, F Reisinger, D Ríos, ...
Nature biotechnology 32 (3), 223-226, 2014
Mandates: Swiss National Science Foundation, US National Institutes of Health, Swedish …
Review
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition
EW Deutsch, A Csordas, Z Sun, A Jarnuczak, Y Perez-Riverol, T Ternent, ...
Nucleic acids research, gkw936, 2016
Mandates: US National Institutes of Health, UK Biotechnology and Biological Sciences …
Review
A guided tour of the Trans‐Proteomic Pipeline
EW Deutsch, L Mendoza, D Shteynberg, T Farrah, H Lam, N Tasman, ...
Proteomics 10 (6), 1150-1159, 2010
Mandates: US National Institutes of Health
Review
The ProteomeXchange consortium in 2020: enabling ‘big data’approaches in proteomics
EW Deutsch, N Bandeira, V Sharma, Y Perez-Riverol, JJ Carver, ...
Nucleic acids research 48 (D1), D1145-D1152, 2020
Mandates: US National Science Foundation, US National Institutes of Health, UK …
Review
mzML—a community standard for mass spectrometry data
L Martens, M Chambers, M Sturm, D Kessner, F Levander, J Shofstahl, ...
Molecular & Cellular Proteomics 10 (1), 2011
Mandates: US National Institutes of Health
Review
iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates
D Shteynberg, EW Deutsch, H Lam, JK Eng, Z Sun, N Tasman, ...
Molecular & cellular proteomics 10 (12), 2011
Mandates: US National Institutes of Health
Review
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project
CF Taylor, D Field, SA Sansone, J Aerts, R Apweiler, M Ashburner, ...
Nature biotechnology 26 (8), 889-896, 2008
Mandates: US National Institutes of Health
Review
PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows
EW Deutsch, H Lam, R Aebersold
EMBO reports 9 (5), 429-434, 2008
Mandates: Swiss National Science Foundation, US National Institutes of Health
Review
Targeted peptide measurements in biology and medicine: best practices for mass spectrometry-based assay development using a fit-for-purpose approach
SA Carr, SE Abbatiello, BL Ackermann, C Borchers, B Domon, ...
Molecular & Cellular Proteomics 13 (3), 907-917, 2014
Mandates: US National Institutes of Health
Review
A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas
T Farrah, EW Deutsch, GS Omenn, DS Campbell, Z Sun, JA Bletz, ...
Molecular & cellular proteomics 10 (9), 2011
Mandates: Swiss National Science Foundation, US National Institutes of Health
Review
Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans
J Malmström, M Beck, A Schmidt, V Lange, EW Deutsch, R Aebersold
Nature 460 (7256), 762-765, 2009
Mandates: Swiss National Science Foundation, US National Institutes of Health
Review
The human proteome project: current state and future direction
P Legrain, R Aebersold, A Archakov, A Bairoch, K Bala, L Beretta, ...
Molecular & cellular proteomics 10 (7), 2011
Mandates: US National Institutes of Health
Review
A repository of assays to quantify 10,000 human proteins by SWATH-MS
G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ...
Scientific data 1 (1), 1-15, 2014
Mandates: Swiss National Science Foundation, US National Institutes of Health …
Review
A HUPO test sample study reveals common problems in mass spectrometry–based proteomics
AW Bell, EW Deutsch, CE Au, RE Kearney, R Beavis, S Sechi, T Nilsson, ...
Nature methods 6 (6), 423-430, 2009
Mandates: US National Institutes of Health, Canadian Institutes of Health Research …
Review
The ProteomeXchange consortium at 10 years: 2023 update
EW Deutsch, N Bandeira, Y Perez-Riverol, V Sharma, JJ Carver, ...
Nucleic acids research 51 (D1), D1539-D1548, 2023
Mandates: US National Science Foundation, US National Institutes of Health, National …
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