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Clonal replacement of tumor-specific T cells following PD-1 blockade KE Yost, AT Satpathy, DK Wells, Y Qi, C Wang, R Kageyama, ... Nature medicine 25 (8), 1251-1259, 2019 | 1291 | 2019 |
Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion AT Satpathy, JM Granja, KE Yost, Y Qi, F Meschi, GP McDermott, ... Nature biotechnology 37 (8), 925-936, 2019 | 807 | 2019 |
Transient rest restores functionality in exhausted CAR-T cells through epigenetic remodeling EW Weber, KR Parker, E Sotillo, RC Lynn, H Anbunathan, J Lattin, ... Science 372 (6537), eaba1786, 2021 | 480 | 2021 |
Coupled single-cell CRISPR screening and epigenomic profiling reveals causal gene regulatory networks AJ Rubin, KR Parker, AT Satpathy, Y Qi, B Wu, AJ Ong, MR Mumbach, ... Cell 176 (1), 361-376. e17, 2019 | 286 | 2019 |
Immune modulation by MANF promotes tissue repair and regenerative success in the retina J Neves, J Zhu, P Sousa-Victor, M Konjikusic, R Riley, S Chew, Y Qi, ... Science 353 (6294), aaf3646, 2016 | 251 | 2016 |
Preventing age-related decline of gut compartmentalization limits microbiota dysbiosis and extends lifespan H Li, Y Qi, H Jasper Cell host & microbe 19 (2), 240-253, 2016 | 235 | 2016 |
B cell-specific XIST complex enforces X-inactivation and restrains atypical B cells B Yu, Y Qi, R Li, Q Shi, AT Satpathy, HY Chang Cell 184 (7), 1790-1803. e17, 2021 | 174 | 2021 |
Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions RA Flynn, JA Belk, Y Qi, Y Yasumoto, J Wei, MM Alfajaro, Q Shi, ... Cell 184 (9), 2394-2411. e16, 2021 | 165 | 2021 |
Transcript-indexed ATAC-seq for precision immune profiling AT Satpathy, N Saligrama, JD Buenrostro, Y Wei, B Wu, AJ Rubin, ... Nature medicine 24 (5), 580-590, 2018 | 136 | 2018 |
Single-cell lineage tracing by endogenous mutations enriched in transposase accessible mitochondrial DNA J Xu, K Nuno, UM Litzenburger, Y Qi, MR Corces, R Majeti, HY Chang Elife 8, e45105, 2019 | 134 | 2019 |
Divergent clonal differentiation trajectories of T cell exhaustion B Daniel, KE Yost, S Hsiung, K Sandor, Y Xia, Y Qi, KJ Hiam-Galvez, ... Nature immunology 23 (11), 1614-1627, 2022 | 118 | 2022 |
Non-canonical odor coding in the mosquito M Herre, OV Goldman, TC Lu, G Caballero-Vidal, Y Qi, ZN Gilbert, Z Gong, ... Cell 185 (17), 3104-3123. e28, 2022 | 116 | 2022 |
The role of Xist‐mediated Polycomb recruitment in the initiation of X‐chromosome inactivation A Bousard, AC Raposo, JJ Żylicz, C Picard, VB Pires, Y Qi, C Gil, L Syx, ... EMBO reports 20 (10), e48019, 2019 | 116 | 2019 |
PERK Limits Drosophila Lifespan by Promoting Intestinal Stem Cell Proliferation in Response to ER Stress L Wang, HD Ryoo, Y Qi, H Jasper PLoS genetics 11 (5), e1005220, 2015 | 111 | 2015 |
Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells CA Tsuchida, N Brandes, R Bueno, M Trinidad, T Mazumder, B Yu, ... Cell 186 (21), 4567-4582. e20, 2023 | 98 | 2023 |
Piwi is required to limit exhaustion of aging somatic stem cells P Sousa-Victor, A Ayyaz, R Hayashi, Y Qi, DT Madden, VV Lunyak, ... Cell reports 20 (11), 2527-2537, 2017 | 92 | 2017 |
HiChIRP reveals RNA-associated chromosome conformation MR Mumbach, JM Granja, RA Flynn, CM Roake, AT Satpathy, AJ Rubin, ... Nature methods 16 (6), 489-492, 2019 | 91 | 2019 |
Control of metabolic adaptation to fasting by dILP6-induced insulin signaling in Drosophila oenocytes D Chatterjee, SD Katewa, Y Qi, SA Jackson, P Kapahi, H Jasper Proceedings of the National Academy of Sciences 111 (50), 17959-17964, 2014 | 90 | 2014 |
Dpp signaling determines regional stem cell identity in the regenerating adult Drosophila gastrointestinal tract H Li, Y Qi, H Jasper Cell reports 4 (1), 10-18, 2013 | 83 | 2013 |