| AlignS: A processing-in-memory accelerator for DNA short read alignment leveraging SOT-MRAM S Angizi, J Sun, W Zhang, D Fan Proceedings of the 56th Annual Design Automation Conference 2019, 1-6, 2019 | 95 | 2019 |
| Graphs: A graph processing accelerator leveraging sot-mram S Angizi, J Sun, W Zhang, D Fan 2019 Design, Automation & Test in Europe Conference & Exhibition (DATE), 378-383, 2019 | 61 | 2019 |
| Multi-omics data integration by generative adversarial network KT Ahmed, J Sun, S Cheng, J Yong, W Zhang Bioinformatics 38 (1), 179-186, 2022 | 58 | 2022 |
| PIM-Aligner: A processing-in-MRAM platform for biological sequence alignment S Angizi, J Sun, W Zhang, D Fan 2020 Design, Automation & Test in Europe Conference & Exhibition (DATE …, 2020 | 36 | 2020 |
| mTOR-regulated U2af1 tandem exon splicing specifies transcriptome features for translational control JW Chang, HS Yeh, M Park, L Erber, J Sun, S Cheng, AM Bui, NA Fahmi, ... Nucleic acids research 47 (19), 10373-10387, 2019 | 18 | 2019 |
| Transcriptional programming drives Ibrutinib-resistance evolution in mantle cell lymphoma X Zhao, MY Wang, H Jiang, T Lwin, PM Park, J Gao, MB Meads, Y Ren, ... Cell reports 34 (11), 2021 | 16 | 2021 |
| As-quant: Detection and visualization of alternative splicing events with rna-seq data NA Fahmi, H Nassereddeen, J Chang, M Park, H Yeh, J Sun, D Fan, ... International journal of molecular sciences 22 (9), 4468, 2021 | 15 | 2021 |
| A large-scale comparative study of isoform expressions measured on four platforms W Zhang, R Petegrosso, JW Chang, J Sun, J Yong, J Chien, R Kuang BMC genomics 21, 1-14, 2020 | 12 | 2020 |
| In silico model for miRNA-mediated regulatory network in cancer KT Ahmed, J Sun, W Chen, I Martinez, W Zhang, J Yong, W Zhang Briefings in Bioinformatics, 2021 | 11 | 2021 |
| LncRNA PAINT is associated with aggressive prostate cancer and dysregulation of cancer hallmark genes MF Hasan, K Ganapathy, J Sun, A Khatib, T Andl, JN Soulakova, ... International journal of cancer 149 (4), 944-958, 2021 | 10 | 2021 |
| Aligner-d: Leveraging in-dram computing to accelerate dna short read alignment F Zhang, S Angizi, J Sun, W Zhang, D Fan IEEE Journal on Emerging and Selected Topics in Circuits and Systems 13 (1 …, 2023 | 8 | 2023 |
| An intrinsic purine metabolite AICAR blocks lung tumour growth by targeting oncoprotein mucin 1 F Aftab, A Rodriguez-Fuguet, L Silva, IS Kobayashi, J Sun, K Politi, ... British Journal of Cancer 128 (9), 1647-1664, 2023 | 6 | 2023 |
| mTOR contributes to the proteome diversity through transcriptome-wide alternative splicing S Cheng, NA Fahmi, M Park, J Sun, K Thao, HS Yeh, W Zhang, J Yong International journal of molecular sciences 23 (20), 12416, 2022 | 6 | 2022 |
| GraphS: A graph processing accelerator leveraging SOT-MRAM. In 2019 Design, Automation & Test in Europe Conference & Exhibition (DATE) S Angizi, J Sun, W Zhang, D Fan IEEE, 378ś383, 2019 | 6 | 2019 |
| Computational methods to study human transcript variants in COVID-19 infected lung cancer cells J Sun, NA Fahmi, H Nassereddeen, S Cheng, I Martinez, D Fan, J Yong, ... International journal of molecular sciences 22 (18), 9684, 2021 | 5 | 2021 |
| Platform-integrated mRNA isoform quantification J Sun, JW Chang, T Zhang, J Yong, R Kuang, W Zhang Bioinformatics 36 (8), 2466-2473, 2020 | 5 | 2020 |
| 53BP1-ACLY-SLBP-coordinated activation of replication-dependent histone biogenesis maintains genomic integrity TT Wu, S Jun, EJ Choi, J Sun, EB Yang, HS Lee, SY Kim, NA Fahmi, ... Nucleic acids research 50 (3), 1465-1483, 2022 | 2 | 2022 |
| Dichotomous intronic polyadenylation profiles reveal multifaceted gene functions in the pan-cancer transcriptome J Sun, JY Kim, S Jun, M Park, E de Jong, JW Chang, S Cheng, D Fan, ... Experimental & Molecular Medicine 56 (10), 2145-2161, 2024 | 1 | 2024 |
| Deletion of exons 2 and 3 from Actb and cell immortalization lead to widespread, β-actin independent alterations in gene expression associated with cell cycle control LJ Sundby, WM Southern, J Sun, X Patrinostro, W Zhang, J Yong, ... European Journal of Cell Biology 103 (2), 151397, 2024 | 1 | 2024 |
| Multimodal joint deconvolution and integrative signature selection in proteomics Y Pan, X Wang, J Sun, C Liu, J Peng, Q Li Communications Biology 7 (1), 493, 2024 | 1 | 2024 |
Wei ZhangAssociate Professor of Computer Science at University of Central FloridaDirección de correo verificada de ucf.edu
