Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma RP Koche, E Rodriguez-Fos, K Helmsauer, M Burkert, IC MacArthur, ... Nature Genetics 52 (1), 29-34, 2020 | 292 | 2020 |
Enhancer hijacking determines extrachromosomal circular MYCN amplicon architecture in neuroblastoma K Helmsauer, ME Valieva, S Ali, RC González, R Schöpflin, C Röefzaad, ... Nature Communications 11 (1), 1-12, 2020 | 174 | 2020 |
Re-analysis of public genetic data reveals a rare X-chromosomal variant associated with type 2 diabetes S Bonàs-Guarch, M Guindo-Martínez, I Miguel-Escalada, N Grarup, ... Nature communications 9 (1), 321, 2018 | 130 | 2018 |
PGBD5 promotes site-specific oncogenic mutations in human tumors AG Henssen, R Koche, J Zhuang, E Jiang, C Reed, A Eisenberg, E Still, ... Nature genetics 49 (7), 1005-1014, 2017 | 101 | 2017 |
Parallel sequencing of extrachromosomal circular DNAs and transcriptomes in single cancer cells R Chamorro González, T Conrad, MC Stöber, R Xu, M Giurgiu, ... Nature Genetics 55 (5), 880-890, 2023 | 44 | 2023 |
Mutations in ALK signaling pathways conferring resistance to ALK inhibitor treatment lead to collateral vulnerabilities in neuroblastoma cells M Berlak, E Tucker, M Dorel, A Winkler, A McGearey, E Rodriguez-Fos, ... Molecular Cancer 21 (1), 126, 2022 | 39 | 2022 |
Defining the landscape of circular RNAs in neuroblastoma unveils a global suppressive function of MYCN S Fuchs, C Danßmann, F Klironomos, A Winkler, J Fallmann, ... Nature Communications 14 (1), 3936, 2023 | 11 | 2023 |
Mutational topography reflects clinical neuroblastoma heterogeneity E Rodriguez-Fos, M Planas-Fèlix, M Burkert, M Puiggròs, J Toedling, ... Cell Genomics 3 (10), 2023 | 9 | 2023 |
Decoil: Reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data M Giurgiu, N Wittstruck, E Rodriguez-Fos, RC Gonzalez, L Brückner, ... International Conference on Research in Computational Molecular Biology, 406-411, 2024 | 5 | 2024 |
Passenger Gene Coamplifications Create Collateral Therapeutic Vulnerabilities in Cancer Y Bei, L Bramé, M Kirchner, R Fritsche-Guenther, S Kunz, A Bhattacharya, ... Cancer Discovery 14 (3), 492-507, 2024 | 5 | 2024 |
A transposase-derived gene required for human brain development LJ Zapater, SA Lewis, RL Gutierrez, M Yamada, E Rodriguez-Fos, ... bioRxiv, 2023.04. 28.538770, 2023 | 5 | 2023 |
Neuroblastoma Risk Assessment and Treatment Stratification with Hybrid Capture-Based Panel Sequencing A Szymansky, LM Kruetzfeldt, LC Heukamp, F Hertwig, J Theissen, ... Journal of Personalized Medicine 11 (8), 691, 2021 | 5 | 2021 |
Reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data using Decoil M Giurgiu, N Wittstruck, E Rodriguez-Fos, RC González, L Brückner, ... Genome Research 34 (9), 1355-1364, 2024 | 4 | 2024 |
Extrachromosomal circular DNA promotes inflammation and hepatocellular carcinoma development LK Chan, J Shan, E Rodriguez-Fos, M Healy, P Leary, R Parrotta, ... bioRxiv, 2025 | | 2025 |